6VAO
Human cofilin-1 decorated actin filament
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
A [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
I [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
I [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
B [auth J] | SCOP2B Superfamily | Actin depolymerizing proteins | 8038510 | 3000430 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2B Superfamily | Actin depolymerizing proteins | 8038510 | 3000430 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Actin depolymerizing proteins | 8038510 | 3000430 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Actin depolymerizing proteins | 8038510 | 3000430 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | Actin depolymerizing proteins | 8038510 | 3000430 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | Actin_1st | e6vaoD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
A [auth D] | Actin_2nd | e6vaoD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
C [auth A] | Actin_1st | e6vaoA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
C [auth A] | Actin_2nd | e6vaoA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
E [auth B] | Actin_1st | e6vaoB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
E [auth B] | Actin_2nd | e6vaoB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
G [auth C] | Actin_1st | e6vaoC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
G [auth C] | Actin_2nd | e6vaoC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
I [auth E] | Actin_1st | e6vaoE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
I [auth E] | Actin_2nd | e6vaoE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
B [auth J] | Cofilin_ADF | e6vaoJ1 | A: a+b three layers | X: Gelsolin-like (From Topology) | H: Gelsolin-like (From Topology) | T: Gelsolin-like | F: Cofilin_ADF | ECOD (1.6) |
D [auth F] | Cofilin_ADF | e6vaoF1 | A: a+b three layers | X: Gelsolin-like (From Topology) | H: Gelsolin-like (From Topology) | T: Gelsolin-like | F: Cofilin_ADF | ECOD (1.6) |
F [auth G] | Cofilin_ADF | e6vaoG1 | A: a+b three layers | X: Gelsolin-like (From Topology) | H: Gelsolin-like (From Topology) | T: Gelsolin-like | F: Cofilin_ADF | ECOD (1.6) |
H | Cofilin_ADF | e6vaoH1 | A: a+b three layers | X: Gelsolin-like (From Topology) | H: Gelsolin-like (From Topology) | T: Gelsolin-like | F: Cofilin_ADF | ECOD (1.6) |
J [auth I] | Cofilin_ADF | e6vaoI1 | A: a+b three layers | X: Gelsolin-like (From Topology) | H: Gelsolin-like (From Topology) | T: Gelsolin-like | F: Cofilin_ADF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth J], D [auth F], F [auth G], H, J [auth I] | PF00241 | Cofilin/tropomyosin-type actin-binding protein (Cofilin_ADF) | Cofilin/tropomyosin-type actin-binding protein | Severs actin filaments and binds to actin monomers. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D], C [auth A], E [auth B], G [auth C], I [auth E] | IPR020902 | Actin/actin-like conserved site | Conserved Site |
A [auth D], C [auth A], E [auth B], G [auth C], I [auth E] | IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily |
A [auth D], C [auth A], E [auth B], G [auth C], I [auth E] | IPR004001 | Actin, conserved site | Conserved Site |
A [auth D], C [auth A], E [auth B], G [auth C], I [auth E] | IPR004000 | Actin family | Family |
B [auth J], D [auth F], F [auth G], H, J [auth I] | IPR029006 | ADF-H/Gelsolin-like domain superfamily | Homologous Superfamily |
B [auth J], D [auth F], F [auth G], H, J [auth I] | IPR017904 | ADF/Cofilin | Family |
B [auth J], D [auth F], F [auth G], H, J [auth I] | IPR002108 | Actin-depolymerising factor homology domain | Domain |