6P5K

Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth AC]SCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
F [auth AC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
L [auth AI]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
M [auth AJ]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
P [auth AN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
W [auth AU]SCOP2B Superfamily60S Ribosomal protein L22e 8061156 3002158 SCOP2B (2022-06-29)
X [auth AV]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
AA [auth AY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
BA [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
CA [auth Aa]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
HA [auth Af]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
IA [auth Ag]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
KA [auth Ai]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
NA [auth Al]SCOP2B SuperfamilyRibosomal protein L39e 8095597 3001756 SCOP2B (2022-06-29)
RA [auth Ap]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
TA [auth AK]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)
WA [auth C]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
ZA [auth F]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052745 3001473 SCOP2B (2022-06-29)
ZA [auth F]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052747 3000334 SCOP2B (2022-06-29)
ZA [auth F]SCOP2B SuperfamilyNucleic acid-binding proteins 8052746 3000135 SCOP2B (2022-06-29)
FB [auth L]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055720 3000034 SCOP2B (2022-06-29)
GB [auth M]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
GB [auth M]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
HB [auth N]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
IB [auth O]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
IB [auth O]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
JB [auth P]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
LB [auth R]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
NB [auth T]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
OB [auth U]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
PB [auth V]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
QB [auth W]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053140 3000068 SCOP2B (2022-06-29)
RB [auth X]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
UB [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
VB [auth b]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053150 3000068 SCOP2B (2022-06-29)
XB [auth d]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
YB [auth e]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
ZB [auth f]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
Z [auth AX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
EA [auth Ac]SCOP2 FamilyL30e/L7ae ribosomal proteins 8094952 4001513 SCOP2 (2022-06-29)
EA [auth Ac]SCOP2 SuperfamilyL30e-like 8094953 3001739 SCOP2 (2022-06-29)
GA [auth Ae]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
AB [auth G]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth AA]Ribosomal_L2_1e6p5kAA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth AA]Ribosomal_L2_C_2e6p5kAA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
E [auth AB]Ribosomal_L3e6p5kAB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
F [auth AC]Ribosomal_L4e6p5kAC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth AC]Ribos_L4_asso_Ce6p5kAC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
G [auth AD]Ribosomal_L5ee6p5kAD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
H [auth AE]Ribosomal_L6ee6p5kAE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
I [auth AF]Ribosomal_L30_1e6p5kAF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
J [auth AG]Ribosomal_L7Ae_1e6p5kAG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
K [auth AH]Ribosomal_L6_2e6p5kAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
K [auth AH]Ribosomal_L6e6p5kAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
L [auth AI]Ribosomal_L16e6p5kAI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth AJ]Ribosomal_L5_Ce6p5kAJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
N [auth AL]Ribosomal_L13ee6p5kAL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth AM]Ribosomal_L14ee6p5kAM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth AN]Ribosomal_L15ee6p5kAN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
Q [auth AO]Ribosomal_L13e6p5kAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth AP]Ribosomal_L22e6p5kAP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth AQ]Ribosomal_L18e6p5kAQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth AR]Ribosomal_L19e_Ne6p5kAR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
T [auth AR]Ribosomal_L19e_Ce6p5kAR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
V [auth AT]Ribosomal_L21ee6p5kAT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth AU]Ribosomal_L22ee6p5kAU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
X [auth AV]Ribosomal_L14e6p5kAV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth AW]Ribosomal_L24ee6p5kAW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
AA [auth AY]Ribosomal_L26e6p5kAY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth AZ]Ribosomal_L27ee6p5kAZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth Aa]Ribosomal_L18e6p5kAa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth Ab]Ribosomal_L29ee6p5kAb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
FA [auth Ad]Ribosomal_L31ee6p5kAd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
HA [auth Af]Ribosomal_L35Aee6p5kAf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
IA [auth Ag]Ribosomal_L34ee6p5kAg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
KA [auth Ai]Ribosomal_L36ee6p5kAi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth Aj]Ribosomal_L37ee6p5kAj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth Ak]Ribosomal_L38ee6p5kAk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
NA [auth Al]Ribosomal_L39e6p5kAl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
PA [auth An]Ribosomal_L41e6p5kAn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QA [auth Ao]Ribosomal_L44e6p5kAo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth Ap]Ribosomal_L37aee6p5kAp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth Ar]Ribosomal_L28ee6p5kAr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
TA [auth AK]Ribosomal_L1_2nd_1e6p5kAK2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
TA [auth AK]Ribosomal_L1_1st_1e6p5kAK1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
VA [auth B]Ribosomal_S2_2e6p5kB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
WA [auth C]Ribosomal_S3Ae_Ne6p5kC1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
WA [auth C]Ribosomal_S3Ae_Ce6p5kC2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
XA [auth D]Ribosomal_S5_C_1e6p5kD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
XA [auth D]Ribosomal_S5_3e6p5kD3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
XA [auth D]Ribosomal_S5_2e6p5kD1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
YA [auth E]Ribosomal_S3_Ce6p5kE2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
YA [auth E]KH_2_3e6p5kE1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
ZA [auth F]Ribosomal_S4ee6p5kF3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
ZA [auth F]40S_S4_Ce6p5kF2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
ZA [auth F]RS4NTe6p5kF1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
BB [auth H]Ribosomal_S6ee6p5kH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
CB [auth I]Ribosomal_S7e_Ne6p5kI2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
CB [auth I]Ribosomal_S7e_C_1e6p5kI1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
DB [auth J]Ribosomal_S8ee6p5kJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
FB [auth L]S10_plectine6p5kL1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
GB [auth M]Ribosomal_S17_1e6p5kM1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
HB [auth N]Ribosomal_L7Aee6p5kN1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
IB [auth O]Ribosomal_S13_Ne6p5kO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
IB [auth O]Ribosomal_S15_2e6p5kO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
JB [auth P]Ribosomal_S11e6p5kP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
LB [auth R]Ribosomal_S9e6p5kR1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
MB [auth S]Ribosomal_S17ee6p5kS1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
NB [auth T]Ribosomal_S13e6p5kT1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
OB [auth U]Ribosomal_S19ee6p5kU1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
PB [auth V]Ribosomal_S10_1e6p5kV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
QB [auth W]Ribosomal_S21ee6p5kW1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
RB [auth X]Ribosomal_S8_N_1e6p5kX2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
RB [auth X]Ribosomal_S8_C_1e6p5kX1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
SB [auth Y]Ribosom_S12_S23e6p5kY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TB [auth Z]Ribosomal_S24ee6p5kZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
UB [auth a]Ribosomal_S25e6p5ka1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
VB [auth b]Ribosomal_S26ee6p5kb1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
WB [auth c]Ribosomal_S27ee6p5kc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
XB [auth d]Ribosomal_S28ee6p5kd1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
YB [auth e]Ribosomal_S14_2e6p5ke1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
ZB [auth f]Ribosomal_S30e6p5kf1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
BC [auth h]DUF1899e6p5kh1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
U [auth AS]Ribosomal_L18Ae6p5kAS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
Z [auth AX]Ribosomal_L23_3e6p5kAX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
EA [auth Ac]Ribosomal_L7Aee6p5kAc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
GA [auth Ae]Ribosomal_L32ee6p5kAe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
JA [auth Ah]Ribosomal_L29_2e6p5kAh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
OA [auth Am]Ribosomal_L40ee6p5kAm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
AB [auth G]Ribosomal_S7_1e6p5kG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
EB [auth K]S4e6p5kK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
KB [auth Q]Ribosomal_S19e6p5kQ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
AC [auth g]Ribosomal_S27e6p5kg1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth AA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
D [auth AA]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
E [auth AB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
F [auth AC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
G [auth AD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
H [auth AE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
H [auth AE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
I [auth AF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
I [auth AF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
I [auth AF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
J [auth AG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth AH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
K [auth AH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth AI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
L [auth AI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
M [auth AJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth AJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
M [auth AJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
N [auth AL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
O [auth AM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth AN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
P [auth AN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth AO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
R [auth AP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
R [auth AP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
T [auth AR]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
T [auth AR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
X [auth AV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Y [auth AW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth AY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth AY]PF00467KOW motif (KOW)KOW motif- Family
BA [auth AZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BA [auth AZ]PF00467KOW motif (KOW)KOW motif- Family
TA [auth AK]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
WA [auth C]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
YA [auth E]PF07650KH domain (KH_2)KH domain- Domain
YA [auth E]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
YA [auth E]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
ZA [auth F]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
ZA [auth F]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
ZA [auth F]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
ZA [auth F]PF00467KOW motif (KOW)KOW motif- Family
BB [auth H]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
BB [auth H]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
FB [auth L]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
GB [auth M]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
GB [auth M]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
HB [auth N]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth O]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
IB [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
JB [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
LB [auth R]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
NB [auth T]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
OB [auth U]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
PB [auth V]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
QB [auth W]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
RB [auth X]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
SB [auth Y]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TB [auth Z]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
Z [auth AX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
AB [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
AB [auth G]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
EB [auth K]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
EB [auth K]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
KB [auth Q]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 5]28S rRNA---
B [auth 7]5S rRNA---
C [auth 8]5.8S rRNA---
D [auth AA]uL2
E [auth AB]uL3---
F [auth AC]uL4
G [auth AD]uL18
H [auth AE]eL6
I [auth AF]uL30
J [auth AG]eL8
K [auth AH]uL6
L [auth AI]uL16
M [auth AJ]uL11
N [auth AL]eL13---
O [auth AM]L14e
P [auth AN]eL15
Q [auth AO]uL13---
R [auth AP]uL22
S [auth AQ]eL18---
T [auth AR]eL19
V [auth AT]eL21
W [auth AU]eL22
X [auth AV]uL14
Y [auth AW]eL24
AA [auth AY]uL24
BA [auth AZ]eL27
CA [auth Aa]uL15
DA [auth Ab]eL29
FA [auth Ad]eL31
HA [auth Af]eL33
IA [auth Ag]eL34
KA [auth Ai]eL36
LA [auth Aj]eL37
MA [auth Ak]eL38---
NA [auth Al]eL39
PA [auth An]eL41
QA [auth Ao]eL42
RA [auth Ap]eL43
SA [auth Ar]eL28
TA [auth AK]uL1
UA [auth 2]18S rRNA---
VA [auth B]uS2---
WA [auth C]eS1
XA [auth D]uS5---
YA [auth E]uS3
ZA [auth F]eS4
BB [auth H]eS6
CB [auth I]eS7
DB [auth J]eS8---
FB [auth L]eS10 -
GB [auth M]uS17
HB [auth N]eS12
IB [auth O]uS15
JB [auth P]uS11
LB [auth R]uS9
MB [auth S]eS17
NB [auth T]uS13
OB [auth U]eS19
PB [auth V]uS10
QB [auth W]eS21
RB [auth X]uS8
SB [auth Y]uS12
TB [auth Z]eS24
UB [auth a]eS25
VB [auth b]eS26
WB [auth c]eS27
XB [auth d]eS28
YB [auth e]eS29
ZB [auth f]eS30
BC [auth h]RACK1
CC [auth 1]IAPV-IRES---
U [auth AS]eL20---
Z [auth AX]eL23
EA [auth Ac]eL30
GA [auth Ae]eL32
JA [auth Ah]eL35
OA [auth Am]eL40---
AB [auth G]uS7
EB [auth K]uS4
KB [auth Q]uS19
AC [auth g]eS31

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth AA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
D [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth AA]IPR002171Large ribosomal subunit protein uL2Family
F [auth AC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth AC]IPR002136Large ribosomal subunit protein uL4Family
F [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth AD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth AD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
H [auth AE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
H [auth AE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth AE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth AE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth AE]IPR000915Large ribosomal subunit protein eL6Family
I [auth AF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth AF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth AF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth AF]IPR039699Large ribosomal subunit protein uL30Family
I [auth AF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
I [auth AF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth AF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
J [auth AG]IPR001921Large ribosomal subunit protein eL8Family
J [auth AG]IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
J [auth AG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth AG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth AG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth AH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth AH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth AH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth AH]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth AI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth AI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth AI]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth AI]IPR047873Large ribosomal subunit protein uL16Family
L [auth AI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
M [auth AJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth AJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth AJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth AJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth AJ]IPR002132Large ribosomal subunit protein uL5Family
O [auth AM]IPR039660Large ribosomal subunit protein eL14Family
O [auth AM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth AM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth AM]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth AM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth AN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth AN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth AN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth AN]IPR000439Large ribosomal subunit protein eL15Family
R [auth AP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AP]IPR001063Large ribosomal subunit protein uL22Family
R [auth AP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
T [auth AR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth AR]IPR039547Large ribosomal subunit protein eL19Family
T [auth AR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth AR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth AR]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth AR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
V [auth AT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth AT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth AT]IPR001147Large ribosomal subunit protein eL21Family
V [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth AU]IPR002671Large ribosomal subunit protein eL22Family
W [auth AU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
X [auth AV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth AV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth AV]IPR000218Large ribosomal subunit protein uL14Family
Y [auth AW]IPR011017TRASH domainDomain
Y [auth AW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth AY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth AY]IPR005824KOWDomain
AA [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth AZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth AZ]IPR001141Large ribosomal subunit protein eL27Family
BA [auth AZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth AZ]IPR005824KOWDomain
BA [auth AZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth Aa]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
CA [auth Aa]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth Aa]IPR030878Large ribosomal subunit protein uL15Family
CA [auth Aa]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth Aa]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth Ab]IPR002673Large ribosomal subunit protein eL29Family
FA [auth Ad]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth Ad]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FA [auth Ad]IPR000054Large ribosomal subunit protein eL31Family
HA [auth Af]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth Af]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth Af]IPR001780Large ribosomal subunit protein eL33Family
HA [auth Af]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
IA [auth Ag]IPR008195Large ribosomal subunit protein eL34Family
IA [auth Ag]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
KA [auth Ai]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Ai]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth Aj]IPR001569Large ribosomal subunit protein eL37Family
LA [auth Aj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth Aj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth Aj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth Al]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth Al]IPR000077Large ribosomal subunit protein eL39Family
NA [auth Al]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth An]IPR007836Large ribosomal subunit protein eS32Family
QA [auth Ao]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth Ao]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth Ao]IPR000552Large ribosomal subunit protein eL42Family
RA [auth Ap]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Ap]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Ap]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth Ar]IPR029004Ribosomal eL28/Mak16Domain
SA [auth Ar]IPR002672Large ribosomal subunit protein eL28Family
TA [auth AK]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
TA [auth AK]IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
TA [auth AK]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
TA [auth AK]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
TA [auth AK]IPR002143Large ribosomal subunit protein uL1Family
TA [auth AK]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
WA [auth C]IPR001593Small ribosomal subunit protein eS1Family
WA [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
WA [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
YA [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
YA [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
YA [auth E]IPR004044K Homology domain, type 2Domain
YA [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
YA [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
YA [auth E]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
YA [auth E]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
ZA [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
ZA [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
ZA [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
ZA [auth F]IPR002942RNA-binding S4 domainDomain
ZA [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
ZA [auth F]IPR000876Small ribosomal subunit protein eS4Family
ZA [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ZA [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
ZA [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
ZA [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
ZA [auth F]IPR005824KOWDomain
BB [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BB [auth H]IPR001377Small ribosomal subunit protein eS6Family
BB [auth H]IPR014401Small ribosomal subunit protein eS6-likeFamily
CB [auth I]IPR000554Small ribosomal subunit protein eS7Family
CB [auth I]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
FB [auth L]IPR037447Small ribosomal subunit protein eS10Family
FB [auth L]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
FB [auth L]IPR005326Plectin/eS10, N-terminalDomain
GB [auth M]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
GB [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GB [auth M]IPR000266Small ribosomal subunit protein uS17Family
GB [auth M]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
GB [auth M]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
HB [auth N]IPR000530Small ribosomal subunit protein eS12Family
HB [auth N]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HB [auth N]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
HB [auth N]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IB [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
IB [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IB [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
IB [auth O]IPR000589Small ribosomal subunit protein uS15Family
JB [auth P]IPR001971Small ribosomal subunit protein uS11Family
JB [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
JB [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
LB [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
LB [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LB [auth R]IPR000754Small ribosomal subunit protein uS9Family
LB [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MB [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
MB [auth S]IPR001210Small ribosomal subunit protein eS17Family
MB [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
NB [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
NB [auth T]IPR001892Small ribosomal subunit protein uS13Family
NB [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
NB [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OB [auth U]IPR001266Small ribosomal subunit protein eS19Family
OB [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
OB [auth U]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
OB [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
PB [auth V]IPR001848Small ribosomal subunit protein uS10Family
PB [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
PB [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
PB [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
PB [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
QB [auth W]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
QB [auth W]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
QB [auth W]IPR001931Small ribosomal subunit protein eS21Family
RB [auth X]IPR000630Small ribosomal subunit protein uS8Family
RB [auth X]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RB [auth X]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
SB [auth Y]IPR006032Small ribosomal subunit protein uS12Family
SB [auth Y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SB [auth Y]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
TB [auth Z]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
TB [auth Z]IPR001976Small ribosomal subunit protein eS24Family
TB [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth Z]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
UB [auth a]IPR004977Small ribosomal subunit protein eS25Family
UB [auth a]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
VB [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
VB [auth b]IPR000892Small ribosomal subunit protein eS26Family
VB [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
WB [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
WB [auth c]IPR000592Small ribosomal subunit protein eS27Family
WB [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
XB [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
XB [auth d]IPR000289Small ribosomal subunit protein eS28Family
YB [auth e]IPR001209Small ribosomal subunit protein uS14Family
YB [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YB [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
YB [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
ZB [auth f]IPR039415Ubiquitin-like protein FUBIDomain
ZB [auth f]IPR019956Ubiquitin domainDomain
ZB [auth f]IPR019954Ubiquitin conserved siteConserved Site
ZB [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
ZB [auth f]IPR000626Ubiquitin-like domainDomain
ZB [auth f]IPR006846Small ribosomal subunit protein eS30Family
BC [auth h]IPR019775WD40 repeat, conserved siteConserved Site
BC [auth h]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
BC [auth h]IPR045223Small ribosomal subunit protein RACK1-likeFamily
BC [auth h]IPR001680WD40 repeatRepeat
BC [auth h]IPR020472G-protein beta WD-40 repeatRepeat
BC [auth h]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
Z [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth AX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
Z [auth AX]IPR019985Large ribosomal subunit protein uL23Family
Z [auth AX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
EA [auth Ac]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Ac]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Ac]IPR000231Large ribosomal subunit protein eL30Family
EA [auth Ac]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Ac]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth Ae]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth Ae]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Ae]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
JA [auth Ah]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth Ah]IPR001854Large ribosomal subunit protein uL29Family
JA [auth Ah]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth Ah]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AB [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
AB [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth G]IPR000235Small ribosomal subunit protein uS7Family
AB [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
EB [auth K]IPR002942RNA-binding S4 domainDomain
EB [auth K]IPR022801Small ribosomal subunit protein uS4Family
EB [auth K]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EB [auth K]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EB [auth K]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
EB [auth K]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
KB [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
KB [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
KB [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
KB [auth Q]IPR002222Small ribosomal subunit protein uS19Family
AC [auth g]IPR019954Ubiquitin conserved siteConserved Site
AC [auth g]IPR000626Ubiquitin-like domainDomain
AC [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
AC [auth g]IPR002906Small ribosomal subunit protein eS31Domain
AC [auth g]IPR019956Ubiquitin domainDomain
AC [auth g]IPR050158Ubiquitin and ubiquitin-likeFamily
AC [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
AC [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily