6N29
Crystal structure of monomeric von Willebrand Factor D`D3 assembly
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | von Willebrand factor type D domain-like | 8107358 | 4007845 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | von Willebrand factor type D domain-like | 8107359 | 3002872 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | von Willebrand factor type D domain-like | 8107359 | 3002872 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e6n29A3 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: UNK_F_TYPE | ECOD (1.6) |
A | TIL | e6n29A1 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: TIL | ECOD (1.6) |
A | Pacifastin_I_1 | e6n29A2 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: Pacifastin_I_1 | ECOD (1.6) |
A | VWC | e6n29A6 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: VWC | ECOD (1.6) |
A | UNK_F_TYPE | e6n29A4 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e6n29B1 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: UNK_F_TYPE | ECOD (1.6) |
B | TIL | e6n29B6 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: TIL | ECOD (1.6) |
B | Pacifastin_I_1 | e6n29B4 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: Pacifastin_I_1 | ECOD (1.6) |
B | VWC | e6n29B3 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: VWC | ECOD (1.6) |
B | UNK_F_TYPE | e6n29B2 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08742 | C8 domain (C8) | C8 domain | This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often fo ... | Domain | |
PF01826 | Trypsin Inhibitor like cysteine rich domain (TIL) | Trypsin Inhibitor like cysteine rich domain | This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, ... | Domain | |
PF00094 | von Willebrand factor type D domain (VWD) | von Willebrand factor type D domain | Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2 ... | Domain | |
PF16164 | VWA N-terminal (VWA_N2) | VWA N-terminal | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050780 | Mucin/von Willebrand/Thrombospondin superfamily | Family | |
IPR002919 | Trypsin Inhibitor-like, cysteine rich domain | Domain | |
IPR001007 | VWFC domain | Domain | |
IPR037578 | Von Willebrand factor | Family | |
IPR036465 | von Willebrand factor A-like domain superfamily | Homologous Superfamily | |
IPR001846 | von Willebrand factor, type D domain | Domain | |
IPR014853 | VWF/SSPO/Zonadhesin-like, cysteine-rich domain | Domain | |
IPR032361 | von Willebrand factor, VWA N-terminal domain | Domain | |
IPR036084 | Serine protease inhibitor-like superfamily | Homologous Superfamily | |
IPR002035 | von Willebrand factor, type A | Domain | |
IPR006207 | Cystine knot, C-terminal | Domain |