6LHT
Localized reconstruction of coxsackievirus A16 mature virion in complex with Fab 18A7
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8077437 | 3000918 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8077437 | 3000918 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8077437 | 3000918 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8077437 | 3000918 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8077437 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth L] | V-set | e6lhtL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
B [auth H] | V-set_10 | e6lhtH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
C [auth A] | Rhv_5 | e6lhtA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_5 | ECOD (1.6) |
D [auth C] | Rhv_5 | e6lhtC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_5 | ECOD (1.6) |
E [auth D] | Rhv_5 | e6lhtD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_5 | ECOD (1.6) |
F [auth E] | Rhv_5 | e6lhtE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_5 | ECOD (1.6) |
G [auth B] | Rhv_5 | e6lhtB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
D [auth C] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
E [auth D] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
F [auth E] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
G [auth B] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth L] | LIGHT CHAIN VARIABLE REGION OF FAB 18A7,H | V-KAPPA | - | IGKV8-30*01, IGKJ1*01 | V-DOMAIN V-KAPPA | IG | FV-HEAVY_KAPPA | IMGT (202436-0) |
B [auth H] | LIGHT CHAIN VARIABLE REGION OF FAB 18A7,H | VH | - | IGHV1-19*01, IGHJ3*01 | V-DOMAIN VH | IG | FV-HEAVY_KAPPA | IMGT (202436-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth L] | Light Chain | IGKV8 | Kappa | vp1 protein | vp1 protein | vp1 protein | vp1 protein | vp1 protein | SAbDab (2024-09-13) |
B [auth H] | Heavy Chain | IGHV1 | - | vp1 protein | vp1 protein | vp1 protein | vp1 protein | vp1 protein | SAbDab (2024-09-13) |