6IZI
Crystal structure of E. coli peptide deformylase and methionine aminopeptidase fitted into the cryo-EM density map of the complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth P] | SCOP2B Superfamily | Peptide deformylase | 8033706 | 3001229 | SCOP2B (2022-06-29) |
B [auth Q] | SCOP2B Superfamily | Creatinase/aminopeptidase catalytic domain-like | 8041859 | 3000126 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth P] | PF01327 | Polypeptide deformylase (Pep_deformylase) | Polypeptide deformylase | - | Domain |
B [auth Q] | PF00557 | Metallopeptidase family M24 (Peptidase_M24) | Metallopeptidase family M24 | This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth P] | IPR023635 | Peptide deformylase | Family |
A [auth P] | IPR036821 | Peptide deformylase superfamily | Homologous Superfamily |
B [auth Q] | IPR001714 | Peptidase M24, methionine aminopeptidase | Family |
B [auth Q] | IPR002467 | Peptidase M24A, methionine aminopeptidase, subfamily 1 | Family |
B [auth Q] | IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily |
B [auth Q] | IPR000994 | Peptidase M24 | Domain |