6ECS
Crystal structure of WHV core protein mutant Y132A dimer
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ecsa_ | All alpha proteins | Hepatitis B viral capsid (hbcag) | Hepatitis B viral capsid (hbcag) | automated matches | automated matches | WHV (Woodchuck hepatitis virus ) [TaxId: 35269 ], | SCOPe (2.08) |
B | d6ecsb_ | All alpha proteins | Hepatitis B viral capsid (hbcag) | Hepatitis B viral capsid (hbcag) | automated matches | automated matches | WHV (Woodchuck hepatitis virus ) [TaxId: 35269 ], | SCOPe (2.08) |
C | d6ecsc_ | All alpha proteins | Hepatitis B viral capsid (hbcag) | Hepatitis B viral capsid (hbcag) | automated matches | automated matches | WHV (Woodchuck hepatitis virus ) [TaxId: 35269 ], | SCOPe (2.08) |
D | d6ecsd_ | All alpha proteins | Hepatitis B viral capsid (hbcag) | Hepatitis B viral capsid (hbcag) | automated matches | automated matches | WHV (Woodchuck hepatitis virus ) [TaxId: 35269 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Hepatitis B viral capsid (hbcag) | 8094836 | 4001050 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Hepatitis B viral capsid (hbcag) | 8094837 | 3000581 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8094837 | 3000581 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8094837 | 3000581 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8094837 | 3000581 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hepatitis_core | e6ecsA1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
B | Hepatitis_core | e6ecsB1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
C | Hepatitis_core | e6ecsC1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
D | Hepatitis_core | e6ecsD1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (utative) |
B | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (utative) |
C | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (utative) |
D | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00906 | Hepatitis core antigen (Hepatitis_core) | Hepatitis core antigen | The core antigen of hepatitis viruses possesses a carboxyl terminus rich in arginine. On this basis it was predicted that the core antigen would bind DNA [1]. There is some experimental evidence to support this [2]. | Domain |