6COX

CYCLOOXYGENASE-2 (PROSTAGLANDIN SYNTHASE-2) COMPLEXED WITH A SELECTIVE INHIBITOR, SC-558 IN I222 SPACE GROUP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyEGF/Laminin-like 8038309 3000412 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHeme-dependent peroxidases 8038293 3000844 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEGF/Laminin-like 8038309 3000412 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyHeme-dependent peroxidases 8038293 3000844 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAn_peroxidasee6coxA1 A: alpha complex topologyX: Heme-dependent peroxidases (From Topology)H: Heme-dependent peroxidases (From Topology)T: Heme-dependent peroxidasesF: An_peroxidaseECOD (1.6)
AhEGF_4e6coxA2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
BAn_peroxidasee6coxB1 A: alpha complex topologyX: Heme-dependent peroxidases (From Topology)H: Heme-dependent peroxidases (From Topology)T: Heme-dependent peroxidasesF: An_peroxidaseECOD (1.6)
BhEGF_4e6coxB2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
A1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal typeCATH (4.3.0)
B2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
B1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal typeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00008EGF-like domain (EGF)EGF-like domainThere is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.
Domain
A, B
PF03098Animal haem peroxidase (An_peroxidase)Animal haem peroxidase- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
CYCLOOXYGENASE-2