Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARAG1_1ste6cikA3 A: alpha arraysX: HTHH: HTHT: Ribbon-helix-helixF: RAG1_1stECOD (1.6)
ARAG1_3rde6cikA1 A: alpha bundlesX: V(D)J recombination-activating protein 1 helical bundle domain (From Topology)H: V(D)J recombination-activating protein 1 helical bundle domain (From Topology)T: V(D)J recombination-activating protein 1 helical bundle domainF: RAG1_3rdECOD (1.6)
ARAG1_2nde6cikA2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RAG1_2ndECOD (1.6)
CRAG1_1ste6cikC1 A: alpha arraysX: HTHH: HTHT: Ribbon-helix-helixF: RAG1_1stECOD (1.6)
CRAG1_3rde6cikC3 A: alpha bundlesX: V(D)J recombination-activating protein 1 helical bundle domain (From Topology)H: V(D)J recombination-activating protein 1 helical bundle domain (From Topology)T: V(D)J recombination-activating protein 1 helical bundle domainF: RAG1_3rdECOD (1.6)
CRAG1_2nde6cikC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RAG1_2ndECOD (1.6)
BRAG2e6cikB1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: RAG2ECOD (1.6)
DRAG2e6cikD1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: RAG2ECOD (1.6)
E [auth N]HMG_boxe6cikN2 A: alpha arraysX: HMG-box (From Topology)H: HMG-box (From Topology)T: HMG-boxF: HMG_boxECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D
PF03089Recombination activating protein 2 (RAG2)Recombination activating protein 2- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
V(D)J recombination-activating protein 1
B, D
V(D)J recombination-activating protein 2
E [auth N]High mobility group protein B1
Intact 12RSS substrate reverse strand---
G [auth I]Intact 12RSS substrate forward strand---
H [auth G]Nicked 23RSS intermediate reverse strand---
I [auth J]DNA (5'-D(*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3')---
J [auth M]Nicked 23RSS intermediate forward strand---