6BHR
HIV-1 immature CTD-SP1 hexamer in complex with IP6
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth G] | d6bhrg_ | All alpha proteins | Acyl carrier protein-like | Retrovirus capsid dimerization domain-like | Retrovirus capsid protein C-terminal domain | automated matches | (Human immunodeficiency virus type 1 BH10 ) [TaxId: 11678 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth G] | SCOP2 Family | Retrovirus capsid protein C-terminal domain | 8077055 | 4000865 | SCOP2 (2022-06-29) |
A [auth G] | SCOP2 Superfamily | Retrovirus capsid dimerization domain-like | 8077056 | 3001819 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth G] | Gag_p24_C | e6bhrG1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: Gag_p24_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth G] | 1.10.1200.30 | Mainly Alpha | Orthogonal Bundle | Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein | Chain A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth G] | IPR000071 | Immunodeficiency lentiviral matrix, N-terminal | Domain |
A [auth G] | IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain |
A [auth G] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
A [auth G] | IPR001878 | Zinc finger, CCHC-type | Domain |
A [auth G] | IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
A [auth G] | IPR010999 | Retroviral matrix protein | Homologous Superfamily |
A [auth G] | IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily |
A [auth G] | IPR050195 | Primate lentivirus group Gag polyprotein | Family |
A [auth G] | IPR014817 | Gag protein p6 | Domain |
A [auth G] | IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |