Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIon_transe5k47B1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
BPKD_channele5k47B2 A: a+b two layersX: Polycystin-mucolipin domain (From Topology)H: Polycystin-mucolipin domain (From Topology)T: Polycystin-mucolipin domainF: PKD_channelECOD (1.6)
CIon_transe5k47C2 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
CPKD_channele5k47C1 A: a+b two layersX: Polycystin-mucolipin domain (From Topology)H: Polycystin-mucolipin domain (From Topology)T: Polycystin-mucolipin domainF: PKD_channelECOD (1.6)
DIon_transe5k47D2 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
DPKD_channele5k47D1 A: a+b two layersX: Polycystin-mucolipin domain (From Topology)H: Polycystin-mucolipin domain (From Topology)T: Polycystin-mucolipin domainF: PKD_channelECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF08016Polycystin cation channel (PKD_channel)Polycystin cation channel- Family
A, B, C, D
PF20519Polycystin domain (Polycystin_dom)Polycystin domainThis domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middl ...This domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middle layer, three alpha-helices on one side and a large loop with two short antiparallel beta-sheets on the other [3].
Domain
A, B, C, D
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Polycystin-2

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage