5J72
Cwp6 from Clostridium difficile
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Cwp6 N-terminal domain-like | 8056036 | 4007662 | SCOP2 (2022-06-29) |
A | SCOP2 Family | N-acetylmuramoyl-L-alanine amidase-like | 8056034 | 4001130 | SCOP2 (2022-06-29) |
A | SCOP2 Family | CWBR2 triplet-like | 8056030 | 4007661 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | E set domains | 8056037 | 3000070 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Zn-dependent exopeptidases | 8056035 | 3000662 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CWBR2-like | 8056031 | 3002334 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CWBR2-like | 8056032 | 3002334 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CWBR2-like | 8056033 | 3002334 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8056035 | 3000662 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CWBR2-like | 8056033 | 3002334 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | E set domains | 8056037 | 3000070 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CWBR2-like | 8056031 | 3002334 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CWBR2-like | 8056033 | 3002334 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CWBR2-like | 8056032 | 3002334 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21465 | e5j72A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21465 | ECOD (1.6) |
A | PF01520 | e5j72A5 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: PF01520 | ECOD (1.6) |
A | PF04122 | e5j72A3 | A: a/b three-layered sandwiches | X: Endolysin C-terminal domain (From Topology) | H: Endolysin C-terminal domain (From Topology) | T: Endolysin C-terminal domain | F: PF04122 | ECOD (1.6) |
B | PF21465 | e5j72B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21465 | ECOD (1.6) |
B | PF01520 | e5j72B3 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: PF01520 | ECOD (1.6) |
B | PF04122 | e5j72B1 | A: a/b three-layered sandwiches | X: Endolysin C-terminal domain (From Topology) | H: Endolysin C-terminal domain (From Topology) | T: Endolysin C-terminal domain | F: PF04122 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21465 | Putative N-acetylmuramoyl-L-alanine amidase cwp6, N-terminal domain (Cwp6_N) | Putative N-acetylmuramoyl-L-alanine amidase cwp6, N-terminal domain | This domain is found in the putative N-acetylmuramoyl-L-alanine amidase cwp6 from Clostridioides difficile and similar proteins from firmicutes. Cwp6, which is involved in cell wall remodelling, consists of five domains: an N-terminal (this entry), a ... | Domain | |
PF04122 | ell wall binding domain 2 (CWB2) (CW_binding_2) | ell wall binding domain 2 (CWB2) | This domain is found in 1 to 3 tandem copies in a wide variety of bacterial cell surface proteins. It has been show the three tandem repeats of the CWB2 domain are essential for correct anchoring to the cell wall [1]. It was shown that in SlpA and Cw ... | Domain | |
PF01520 | N-acetylmuramoyl-L-alanine amidase (Amidase_3) | N-acetylmuramoyl-L-alanine amidase | This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls. | Domain |