5IKU
Crystal structure of the Hathewaya histolytica ColG tandem collagen-binding domain s3as3b in the presence of calcium at 1.9 Angstrom resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5ikua1 | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Collagen-binding domain | Class 1 collagenase | (Hathewaya histolytica ) [TaxId: 1498 ], | SCOPe (2.08) |
A | d5ikua3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Hathewaya histolytica ) [TaxId: 1498 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04151 | Bacterial pre-peptidase C-terminal domain (PPC) | Bacterial pre-peptidase C-terminal domain | This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (Pfam:PF00801) domain, which also are found in this context. ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR022409 | PKD/Chitinase domain | Domain | |
IPR000601 | PKD domain | Domain | |
IPR013661 | Peptidase M9, collagenase, N-terminal domain | Domain | |
IPR035986 | PKD domain superfamily | Homologous Superfamily | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR041379 | Collagenase ColG-like, catalytic helper subdomain | Domain | |
IPR007280 | Peptidase, C-terminal, archaeal/bacterial | Domain | |
IPR002169 | Peptidase M9A/M9B, collagenase, bacterial | Family |