5GL6
Msmeg rimP
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e5gl6A1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: UNK_F_TYPE | ECOD (1.6) |
A | DUF150 | e5gl6A2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: YhbC-like, N-terminal domain (From Topology) | T: YhbC-like, N-terminal domain | F: DUF150 | ECOD (1.6) |
B | UNK_F_TYPE | e5gl6B2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: UNK_F_TYPE | ECOD (1.6) |
B | DUF150 | e5gl6B1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: YhbC-like, N-terminal domain (From Topology) | T: YhbC-like, N-terminal domain | F: DUF150 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17384 | RimP C-terminal SH3 domain (DUF150_C) | RimP C-terminal SH3 domain | This family represents the C-terminal domain from RimP. | Domain | |
PF02576 | RimP N-terminal domain (RimP_N) | RimP N-terminal domain | This entry represents the N-terminal domain of the ribosome maturation factor RimP (also known as yhbC). RimP facilitates the maturation of the 30S ribosomal subunit [1]. The N-terminal domain contains two alpha-helices and a three-stranded beta-shee ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028989 | Ribosome maturation factor RimP, N-terminal | Domain | |
IPR003728 | Ribosome maturation factor RimP | Family | |
IPR036847 | Ribosome maturation factor RimP, C-terminal domain superfamily | Homologous Superfamily | |
IPR035956 | RimP, N-terminal domain superfamily | Homologous Superfamily | |
IPR028998 | Ribosome maturation factor RimP, C-terminal | Domain |