Annotations: 5EKZ

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5ekza_	Multi-domain proteins (alpha and beta)	YebC-like	YebC-like	automated matches	automated matches	House Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF20772	e5ekzA3	A: alpha arrays	X: Helical bundle domain in YebC-like proteins (From Topology)	H: Helical bundle domain in YebC-like proteins (From Topology)	T: Helical bundle domain in YebC-like proteins	F: PF20772	ECOD (1.6)
A	PF01709	e5ekzA2	A: a+b two layers	X: Alpha-beta plaits	H: Ferredoxin-like domain in YebC (From Topology)	T: Ferredoxin-like domain in YebC	F: PF01709	ECOD (1.6)
A	PF01709	e5ekzA1	A: a+b two layers	X: a+b domain in YebC-like proteins (From Topology)	H: a+b domain in YebC-like proteins (From Topology)	T: a+b domain in YebC-like proteins	F: PF01709	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF20772	TACO1/YebC protein N-terminal domain (TACO1_YebC_N)	TACO1/YebC protein N-terminal domain	This entry represents the N-terminal helical bundle domain from proteins in the TACO1/YebC family which are thought to act as transcriptional regulators. In mammals, The TACO1 protein activates the translation of mitochondrially-encoded COX1 [2,4]. I ...	This entry represents the N-terminal helical bundle domain from proteins in the TACO1/YebC family which are thought to act as transcriptional regulators. In mammals, The TACO1 protein activates the translation of mitochondrially-encoded COX1 [2,4]. In bacteria, it negatively regulates the quorum-sensing response regulator by binding to its promoter region [3].	Domain
A	PF01709	TACO1/YebC second and third domain (Transcrip_reg)	TACO1/YebC second and third domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Translational activator of cytochrome c oxidase 1	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding rRNA binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding mitochondrial ribosome binding	regulation of cellular process mitochondrial translation cellular biosynthetic process regulation of mitochondrial gene expression organonitrogen compound biosynthetic process mitochondrial gene expression regulation of primary metabolic process post-transcriptional regulation of gene expression organic substance metabolic process organic substance biosynthetic process protein metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process regulation of cellular process mitochondrial translation cellular biosynthetic process regulation of mitochondrial gene expression organonitrogen compound biosynthetic process mitochondrial gene expression regulation of primary metabolic process post-transcriptional regulation of gene expression organic substance metabolic process organic substance biosynthetic process protein metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of mitochondrial translation regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process behavior multicellular organismal process system process learning learning or memory nervous system process motor learning cognition respiratory chain complex IV assembly cytochrome complex assembly protein-containing complex organization mitochondrial cytochrome c oxidase assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular component organization or biogenesis mitochondrion organization	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017856	Integrase-like, N-terminal	Homologous Superfamily
A	IPR049083	TACO1/YebC-like, N-terminal domain	Domain
A	IPR048300	TACO1/YebC-like, second and third domains	Domain
A	IPR002876	Transcriptional regulator TACO1-like	Family
A	IPR029072	YebC-like	Homologous Superfamily
A	IPR026564	Transcriptional regulator TACO1-like, domain 3	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.