Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe4nwwA1 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: F_UNCLASSIFIEDECOD (1.6)
APF11729e4nwwA2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF11729ECOD (1.6)
BF_UNCLASSIFIEDe4nwwB1 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: F_UNCLASSIFIEDECOD (1.6)
BPF11729e4nwwB2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF11729ECOD (1.6)
CF_UNCLASSIFIEDe4nwwC2 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: F_UNCLASSIFIEDECOD (1.6)
CPF11729e4nwwC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF11729ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF11729nodavirus capsid protein (Capsid-VNN)nodavirus capsid protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Capsid protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029053Viral coat protein subunitHomologous Superfamily
A, B, C
IPR024292Nodavirus capsidFamily