4N0L
Methanopyrus kandleri Csm3 crystal structure
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4n0lb_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Ferredoxin-like domains from CRISPR-associated proteins | CRISPR-associated protein Csm3-like | CRISPR-associated protein Csm3 | (Methanopyrus kandleri AV19 ) [TaxId: 190192 ], | SCOPe (2.08) |
A | d4n0la_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Ferredoxin-like domains from CRISPR-associated proteins | CRISPR-associated protein Csm3-like | CRISPR-associated protein Csm3 | (Methanopyrus kandleri AV19 ) [TaxId: 190192 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | CRISPR-associated proteins | 8052167 | 3001554 | SCOP2B (2022-06-29) |
A | SCOP2 Family | RAMP-like | 8044861 | 4004180 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CRISPR-associated proteins | 8052167 | 3001554 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | RAMPs | e4n0lB1 | A: a+b two layers | X: Alpha-beta plaits | H: Cas7-related | T: CRISPR-associated protein Cas7/Csa2-related | F: RAMPs | ECOD (1.6) |
A | RAMPs | e4n0lA1 | A: a+b two layers | X: Alpha-beta plaits | H: Cas7-related | T: CRISPR-associated protein Cas7/Csa2-related | F: RAMPs | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03787 | RAMP superfamily (RAMPs) | RAMP superfamily | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR052216 | CRISPR-associated Csm3 endoribonuclease | Family | |
IPR005537 | CRISPR type III-associated protein | Family | |
IPR013412 | CRISPR-associated RAMP Csm3 | Family |