4MZP

MazF from S. aureus crystal form III, C2221, 2.7 A

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
E	d4mzpe1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
E	d4mzpe2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
A	d4mzpa1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
A	d4mzpa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
B	d4mzpb1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
B	d4mzpb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
C	d4mzpc1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
C	d4mzpc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
D	d4mzpd1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
D	d4mzpd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
F	d4mzpf1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
F	d4mzpf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
G	d4mzpg1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
G	d4mzpg2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
H	d4mzph1	All beta proteins	SH3-like barrel	Cell growth inhibitor/plasmid maintenance toxic component	Kid/PemK	automated matches	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)
H	d4mzph2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Staphylococcus aureus subsp. aureus N315 ) [TaxId: 158879 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Cell growth inhibitor/plasmid maintenance toxic component	8076069	3000352	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	PemK_toxin	e4mzpE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
A	PemK_toxin	e4mzpA1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
B	PemK_toxin	e4mzpB1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
C	PemK_toxin	e4mzpC1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
D	PemK_toxin	e4mzpD1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
F	PemK_toxin	e4mzpF1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
G	PemK_toxin	e4mzpG1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)
H	PemK_toxin	e4mzpH1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
A	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
B	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
C	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
D	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
F	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
G	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
H	2.30.30.110	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system (PemK_toxin)	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of ...	PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	MazF mRNA interferase	DNA binding binding organic cyclic compound binding nucleic acid binding endonuclease activity nuclease activity hydrolase activity, acting on ester bonds hydrolase activity catalytic activity RNA binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011067	Plasmid maintenance toxin/Cell growth inhibitor	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003477	mRNA interferase PemK-like	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.