4M7C
Crystal structure of the TRF2-binding motif of SLX4 in complex with the TRFH domain of TRF2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Telomeric repeat binding factor (TRF) dimerisation domain | 8039524 | 3000229 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Telomeric repeat binding factor (TRF) dimerisation domain | 8039524 | 3000229 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08558 | e4m7cA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF08558 | ECOD (1.6) |
B | PF08558 | e4m7cB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF08558 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.210 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Telomere repeat-binding factor, dimerisation domain | CATH (4.3.0) |
B | 1.25.40.210 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Telomere repeat-binding factor, dimerisation domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08558 | Telomere repeat binding factor (TRF) (TRF) | Telomere repeat binding factor (TRF) | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR017357 | Telomeric repeat-binding factor 1/2 | Family | |
IPR031902 | Telomeric repeat-binding factor 2, Rap1-binding domain | Domain | |
IPR030657 | Telomeric repeat-binding factor 2 | Family | |
IPR017930 | Myb domain | Domain | |
IPR013867 | Telomere repeat-binding factor, dimerisation domain | Domain | |
IPR036507 | Telomere repeat-binding factor, dimerisation domain superfamily | Homologous Superfamily | |
IPR001005 | SANT/Myb domain | Domain | |
IPR000210 | BTB/POZ domain | Domain | |
IPR018574 | Structure-specific endonuclease subunit Slx4 | Family | |
IPR006642 | Rad18, zinc finger UBZ4-type | Domain | |
IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily |