4KT3
Structure of a type VI secretion system effector-immunity complex from Pseudomonas protegens
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glucosaminidase | e4kt3A1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Glucosaminidase | ECOD (1.6) |
B | EUF08491 | e4kt3B1 | A: a+b three layers | X: Nat/Ivy | H: Immunity protein of a type VI secretion system effector (From Topology) | T: Immunity protein of a type VI secretion system effector | F: EUF08491 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
B | 3.10.450.170 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01832 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Glucosaminidase) | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase | This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J Swiss:P75942 that has been shown to hydrolyse peptidoglycan [1]. | Domain | |
PF21576 | T6SS, Immunity protein Tgi2PP (T6SS_Tgi2PP) | T6SS, Immunity protein Tgi2PP | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Uncharacterized protein | - | - | ||
Putative lipoprotein | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002901 | Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain | Domain | |
IPR049066 | T6SS, immunity protein Tgi2PP | Family |