4JOI
Crystal structure of the human telomeric Stn1-Ten1 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Stn1_1 | e4joiA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Stn1_1 | ECOD (1.6) |
B | Stn1_1 | e4joiB1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Stn1_1 | ECOD (1.6) |
C [auth D] | Ten1_2 | e4joiD1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ten1_2 | ECOD (1.6) |
D [auth C] | Ten1_2 | e4joiC1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ten1_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
C [auth D] | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
D [auth C] | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01336 | OB-fold nucleic acid binding domain (tRNA_anti-codon) | OB-fold nucleic acid binding domain | This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ... | Domain | |
C [auth D], D [auth C] | PF15490 | Telomere-capping, CST complex subunit (Ten1_2) | Telomere-capping, CST complex subunit | Ten1_2 is a family of primarily plant and vertebrate telomere-capping proteins that is evolutionarily related to the mostly fungal family of Ten1, Pfam:PF12658. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR042082 | CST complex subunit Stn1, wHTH1 motif superfamily | Homologous Superfamily | |
IPR040260 | Replication factor A protein-like | Family | |
IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR014647 | CST complex subunit Stn1 | Family | |
IPR015253 | Stn1, C-terminal | Domain | |
C [auth D], D [auth C] | IPR029146 | CST complex subunit Ten1, animal and plant type | Family |
C [auth D], D [auth C] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |