4FHN
Nup37-Nup120 full-length complex from Schizosaccharomyces pombe
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Scaffolding nucleoporins | 8090982 | 3002255 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090975 | 3000456 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Coat nucleoporins Nup120/Nup160 NTD-like | 8046888 | 4005351 | SCOP2 (2022-06-29) |
D | SCOP2 Family | Nup120 CTD-like | 8090981 | 4007717 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Nucleoporin beta-propeller domain | 8090975 | 3000456 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Scaffolding nucleoporins | 8090982 | 3002255 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ANAPC4_WD40_2 | e4fhnA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
C | ANAPC4_WD40_2 | e4fhnC2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
B | Nup160 | e4fhnB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Nup160 | ECOD (1.6) |
B | EUF08018 | e4fhnB2 | A: alpha arrays | X: Nucleoporin NUP120 helical domain (From Topology) | H: Nucleoporin NUP120 helical domain (From Topology) | T: Nucleoporin NUP120 helical domain | F: EUF08018 | ECOD (1.6) |
B | KOG4521_2nd | e4fhnB3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: KOG4521_2nd | ECOD (1.6) |
D | Nup160 | e4fhnD2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Nup160 | ECOD (1.6) |
D | EUF08018 | e4fhnD1 | A: alpha arrays | X: Nucleoporin NUP120 helical domain (From Topology) | H: Nucleoporin NUP120 helical domain (From Topology) | T: Nucleoporin NUP120 helical domain | F: EUF08018 | ECOD (1.6) |
D | KOG4521_2nd | e4fhnD3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: KOG4521_2nd | ECOD (1.6) |
E [auth X] | ELFV_dehydrog | e4fhnX1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: ELFV_dehydrog | ECOD (1.6) |
E [auth X] | ELFV_dehydrog_N | e4fhnX2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: ELFV_dehydrog_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
PF21486 | Nucleoporin NUP120, helical domain (NUP120_helical) | Nucleoporin NUP120, helical domain | This entry represents the helical domain of Nup120 from S. pombe referred to as the irregular helical bundle (IHB) [1,2], which makes extensive contacts with the propeller and helical bundle at the N-terminal. Nup120 functions as a component of the n ... | Domain | |
PF11715 | Nucleoporin Nup120/160 (Nup160) | Nucleoporin Nup120/160 | - | Repeat | |
E [auth X] | PF02812 | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain (ELFV_dehydrog_N) | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | - | Domain |
E [auth X] | PF00208 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase (ELFV_dehydrog) | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | - | Domain |