4CWC
Structure of Rolling Circle Replication Initiator Protein (RepDE) from Staphylococcus aureus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Replication initiation factor-like | 8050461 | 4006906 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TATA-box binding protein-like | 8052606 | 3000705 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TATA-box binding protein-like | 8052607 | 3000705 | SCOP2 (2022-06-29) |
B [auth C] | SCOP2B Superfamily | TATA-box binding protein-like | 8052606 | 3000705 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | TATA-box binding protein-like | 8052607 | 3000705 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rep_trans | e4cwcA2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: Rep_trans | ECOD (1.6) |
A | EUF08412 | e4cwcA1 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: EUF08412 | ECOD (1.6) |
B [auth C] | Rep_trans | e4cwcC1 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: Rep_trans | ECOD (1.6) |
B [auth C] | EUF08412 | e4cwcC2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: EUF08412 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF22477 | Replication initiation protein, N-terminal (RepD-like_N) | Replication initiation protein, N-terminal | This domain is found at the N-terminal end of Replication initiation protein from Staphylococcus aureus (RepD) and similar bacterial sequences. RepD shows similarity with the extended beta-sheet in TATA binding protein (TBP) [1]. | Domain |
A, B [auth C] | PF02486 | Replication initiation factor (Rep_trans) | Replication initiation factor | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | REPLICATION INITIATION PROTEIN, REPLICATION INITIATION PROTEIN | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR003491 | Replication initiation protein-like, C-terminal | Domain |
A, B [auth C] | IPR003491 | Replication initiation protein-like, C-terminal | Domain |