4BDW
The structure of the FnI-EGF tandem domain of coagulation factor XII in complex with Holmium
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | hEGF_6 | e4bdwA1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_6 | ECOD (1.6) |
A | fn1_1 | e4bdwA2 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: fn1_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00039 | Fibronectin type I domain (fn1) | Fibronectin type I domain | - | Domain | |
PF00008 | EGF-like domain (EGF) | EGF-like domain | There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036943 | Fibronectin type II domain superfamily | Homologous Superfamily | |
IPR018056 | Kringle, conserved site | Conserved Site | |
IPR014394 | Coagulation factor XII/hepatocyte growth factor activator | Family | |
IPR000562 | Fibronectin type II domain | Domain | |
IPR000742 | EGF-like domain | Domain | |
IPR018114 | Serine proteases, trypsin family, histidine active site | Active Site | |
IPR013806 | Kringle-like fold | Homologous Superfamily | |
IPR038178 | Kringle superfamily | Homologous Superfamily | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR000083 | Fibronectin, type I | Domain | |
IPR001314 | Peptidase S1A, chymotrypsin family | Family | |
IPR033116 | Serine proteases, trypsin family, serine active site | Active Site | |
IPR001254 | Serine proteases, trypsin domain | Domain | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR050127 | Serine Proteases (Peptidase S1 Family) | Family | |
IPR000001 | Kringle | Domain |