4A8E
The structure of a dimeric Xer recombinase from archaea
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phage_integrase_C | e4a8eA2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Phage_integrase_C | ECOD (1.6) |
A | Phage_integrase_N | e4a8eA4 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Phage_integrase_N | ECOD (1.6) |
A | Phage_int_SAM_1 | e4a8eA5 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: Phage_int_SAM_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.130 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
A | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00589 | Phage integrase family (Phage_integrase) | Phage integrase family | - | Family | |
PF02899 | Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1) | Phage integrase, N-terminal SAM-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PROBABLE TYROSINE RECOMBINASE XERC-LIKE |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033686 | Tyrosine recombinase XerA | Family | |
IPR011010 | DNA breaking-rejoining enzyme, catalytic core | Homologous Superfamily | |
IPR010998 | Integrase/recombinase, N-terminal | Homologous Superfamily | |
IPR050090 | Bacterial tyrosine recombinase XerC/XerD complex | Family | |
IPR044068 | Core-binding (CB) domain | Domain | |
IPR002104 | Integrase, catalytic domain | Domain | |
IPR004107 | Integrase, SAM-like, N-terminal | Domain | |
IPR013762 | Integrase-like, catalytic domain superfamily | Homologous Superfamily |