3VCF
SSV1 integrase C-terminal catalytic domain (174-335aa)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Archaeal phage integrase-like | 8046165 | 4004922 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | DNA breaking-rejoining enzymes | 8092997 | 3001127 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8092997 | 3001127 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phage_integr_3 | e3vcfA1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Phage_integr_3 | ECOD (1.6) |
B | Phage_integr_3 | e3vcfB1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Phage_integr_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
B | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16795 | Archaeal phage integrase (Phage_integr_3) | Archaeal phage integrase | Catalyses cleavage and ligation of DNA [1-2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011010 | DNA breaking-rejoining enzyme, catalytic core | Homologous Superfamily | |
IPR031857 | Integrase SSV1, C-terminal | Domain | |
IPR012922 | ORF D-335-like | Domain | |
IPR044068 | Core-binding (CB) domain | Domain | |
IPR002104 | Integrase, catalytic domain | Domain | |
IPR013762 | Integrase-like, catalytic domain superfamily | Homologous Superfamily |