3UWX
Crystal structure of UvrA-UvrB complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | UvrA-like | 8018536 | 4004014 | SCOP2 (2022-06-29) |
A | SCOP2 Family | UvrA interaction domain-like | 8056661 | 4007668 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ABC transporter-like P-loop ATPases | 8018537 | 3002020 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | UvrA interaction domain-like | 8056662 | 3002356 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ABC transporter-like P-loop ATPases | 8018538 | 3002020 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8018543 | 3001550 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8018544 | 3001550 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | UvrA insert domain-like | 8056663 | 3002355 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | uvrA_2nd | e3uwxA7 | A: alpha arrays | X: DNA-binding domain in UvrA (From Topology) | H: DNA-binding domain in UvrA (From Topology) | T: DNA-binding domain in UvrA | F: uvrA_2nd | ECOD (1.6) |
A | uvrA_1st | e3uwxA5 | A: a+b two layers | X: UvrB-binding domain of UvrA (From Topology) | H: UvrB-binding domain of UvrA (From Topology) | T: UvrB-binding domain of UvrA | F: uvrA_1st | ECOD (1.6) |
A | ABC_tran | e3uwxA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
A | UvrA | e3uwxA2 | A: few secondary structure elements | X: DnaJ/Hsp40 cysteine-rich domain (From Topology) | H: DnaJ/Hsp40 cysteine-rich domain (From Topology) | T: DnaJ/Hsp40 cysteine-rich domain | F: UvrA | ECOD (1.6) |
B | UB2H_1 | e3uwxB3 | A: beta meanders | X: Colicin E3 ribonuclease domain-like | H: UvrB interaction domain (From Topology) | T: UvrB interaction domain | F: UB2H_1 | ECOD (1.6) |
B | Helicase_C_8 | e3uwxB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_8 | ECOD (1.6) |
B | ResIII | e3uwxB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ResIII | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17760 | UvrA interaction domain (UvrA_inter) | UvrA interaction domain | This domain found in UvrA proteins interacts with the UvrB protein. | Domain | |
PF17755 | UvrA DNA-binding domain (UvrA_DNA-bind) | UvrA DNA-binding domain | - | Domain | |
PF12344 | Ultra-violet resistance protein B (UvrB) | Ultra-violet resistance protein B | - | Family | |
PF00271 | Helicase conserved C-terminal domain (Helicase_C) | Helicase conserved C-terminal domain | The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. | Domain | |
PF04851 | Type III restriction enzyme, res subunit (ResIII) | Type III restriction enzyme, res subunit | - | Family | |
PF17757 | UvrB interaction domain (UvrB_inter) | UvrB interaction domain | This domain is found in the UvrB protein where it interacts with the UvrA protein [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017871 | ABC transporter-like, conserved site | Conserved Site | |
IPR013815 | ATP-grasp fold, subdomain 1 | Homologous Superfamily | |
IPR003439 | ABC transporter-like, ATP-binding domain | Domain | |
IPR041552 | UvrA DNA-binding domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR041102 | UvrA, interaction domain | Domain | |
IPR004602 | UvrABC system subunit A | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR024759 | UvrB, YAD/RRR-motif-containing domain | Domain | |
IPR006935 | Helicase/UvrB, N-terminal | Domain | |
IPR041471 | UvrB, interaction domain | Domain | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR036876 | UVR domain superfamily | Homologous Superfamily | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR001943 | UVR domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR004807 | UvrABC system, subunit B | Family |