Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3s7va_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Bd3s7vb_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Cd3s7vc_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Dd3s7vd_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Ed3s7ve_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Fd3s7vf1 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Fd3s7vf2 Artifacts Tags Tags Tags N-terminal Tags (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Gd3s7vg_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Hd3s7vh_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Id3s7vi_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)
Jd3s7vj_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses automated matches automated matches (Betapolyomavirus tertihominis ) [TaxId: 1891764 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
CSCOP2 Familypapovaviridae-like vp 8098457 4003485 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroup I dsDNA viruses 8098458 3000939 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APolyoma_coate3s7vA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
BPolyoma_coate3s7vB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
CPolyoma_coate3s7vC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
DPolyoma_coate3s7vD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
EPolyoma_coate3s7vE1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
FPolyoma_coate3s7vF1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
GPolyoma_coate3s7vG1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
HPolyoma_coate3s7vH1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
IPolyoma_coate3s7vI1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
JPolyoma_coate3s7vJ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
B2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
C2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
D2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
E2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
F2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
G2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
H2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
I2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
J2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011222Double-stranded DNA virus, group I, capsidHomologous Superfamily
A, B, C, D, E
IPR000662Capsid protein VP1,PolyomavirusFamily
A, B, C, D, E
IPR036931Polyomavirus capsid protein VP1 superfamilyHomologous Superfamily