3QOR
Crystal structure of human nuclear migration protein NudC
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Hsp20 chaperone-like | 8064794 | 3001242 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Hsp20 chaperone-like | 8064794 | 3001242 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Hsp20 chaperone-like | 8064794 | 3001242 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Hsp20 chaperone-like | 8064794 | 3001242 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Nuclear movement domain | 8064793 | 4003073 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Hsp20 chaperone-like | 8064794 | 3001242 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CS | e3qorA1 | A: beta sandwiches | X: HSP20-like | H: HSP20-like chaperones (From Topology) | T: HSP20-like chaperones | F: CS | ECOD (1.6) |
C | CS | e3qorC1 | A: beta sandwiches | X: HSP20-like | H: HSP20-like chaperones (From Topology) | T: HSP20-like chaperones | F: CS | ECOD (1.6) |
B | CS | e3qorB1 | A: beta sandwiches | X: HSP20-like | H: HSP20-like chaperones (From Topology) | T: HSP20-like chaperones | F: CS | ECOD (1.6) |
D | CS | e3qorD1 | A: beta sandwiches | X: HSP20-like | H: HSP20-like chaperones (From Topology) | T: HSP20-like chaperones | F: CS | ECOD (1.6) |
E | CS | e3qorE1 | A: beta sandwiches | X: HSP20-like | H: HSP20-like chaperones (From Topology) | T: HSP20-like chaperones | F: CS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.790 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C | 2.60.40.790 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 2.60.40.790 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D | 2.60.40.790 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
E | 2.60.40.790 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04969 | CS domain (CS) | CS domain | The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain ... | Domain | |
PF04969 | CS domain (CS) | CS domain | The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain ... | Domain | |
PF04969 | CS domain (CS) | CS domain | The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain ... | Domain | |
PF04969 | CS domain (CS) | CS domain | The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037898 | NudC family | Family | |
IPR025934 | NudC N-terminal domain | Domain | |
IPR007052 | CS domain | Domain | |
IPR032572 | Nuclear migration protein nudC | Domain | |
IPR008978 | HSP20-like chaperone | Homologous Superfamily | |
IPR037898 | NudC family | Family | |
IPR025934 | NudC N-terminal domain | Domain | |
IPR007052 | CS domain | Domain | |
IPR032572 | Nuclear migration protein nudC | Domain | |
IPR008978 | HSP20-like chaperone | Homologous Superfamily | |
IPR037898 | NudC family | Family | |
IPR025934 | NudC N-terminal domain | Domain | |
IPR007052 | CS domain | Domain | |
IPR032572 | Nuclear migration protein nudC | Domain | |
IPR008978 | HSP20-like chaperone | Homologous Superfamily | |
IPR037898 | NudC family | Family | |
IPR025934 | NudC N-terminal domain | Domain | |
IPR007052 | CS domain | Domain | |
IPR032572 | Nuclear migration protein nudC | Domain | |
IPR008978 | HSP20-like chaperone | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
CSX | Parent Component: CYS :  AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 | |
CSD | Parent Component: CYS :  AA0451 , AA0262 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , L-cysteine sulfinic acid MOD:00267 | |
OCS | Parent Component: CYS :  AA0451 , AA0262 , AA0556 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , L-cysteine sulfinic acid MOD:00267 , L-cysteic acid (L-cysteine sulfonic acid) MOD:00460 |