3QLL
Crystal Structure of RipC from Yersinia pestis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3qlla_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
B | d3qllb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
C | d3qllc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Phosphoenolpyruvate/pyruvate domain | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | HpcH/HpaI aldolase | 8083969 | 4003274 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Phosphoenolpyruvate/pyruvate domain | 8083970 | 3000510 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8083970 | 3000510 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8083970 | 3000510 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HpcH_HpaI | e3qllA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: HpcH_HpaI | ECOD (1.6) |
B | HpcH_HpaI | e3qllB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: HpcH_HpaI | ECOD (1.6) |
C | HpcH_HpaI | e3qllC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: HpcH_HpaI | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
B | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
C | 3.20.20.60 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphoenolpyruvate-binding domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03328 | HpcH/HpaI aldolase/citrate lyase family (HpcH_HpaI) | HpcH/HpaI aldolase/citrate lyase family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Citrate lyase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | Homologous Superfamily | |
IPR040442 | Pyruvate kinase-like domain superfamily | Homologous Superfamily | |
IPR005000 | HpcH/HpaI aldolase/citrate lyase domain | Domain | |
IPR011206 | Citrate lyase beta subunit-like | Family |