3PSF


Crystal Structure of the Spt6 core domain from Saccharomyces cerevisiae, Form Spt6(236-1259)


Domain Annotation: CATH CATH Database (version 4.2.0) Homepage

ChainDomainClassArchitectureTopologyHomology
A1.10.150.850 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1
A1.10.150.850 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1
A1.10.10.650 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A RuvA domain 2-like
A1.10.3500.10 Mainly Alpha Orthogonal Bundle Tex N-terminal region-like Tex N-terminal region-like
A1.10.3500.10 Mainly Alpha Orthogonal Bundle Tex N-terminal region-like Tex N-terminal region-like
A1.10.3500.10 Mainly Alpha Orthogonal Bundle Tex N-terminal region-like Tex N-terminal region-like
A3.30.420.140 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5
A3.30.420.140 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5
A1.10.10.2740 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Spt6, Death-like domain

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
APF14639Holliday-junction resolvase-like of SPT6 (YqgF)Holliday-junction resolvase-like of SPT6The YqgF domain of SPT6 proteins is homologous to the E.coli RuvC [1] but its putative catalytic site lacks the carboxylate side chains critical for coordinating magnesium ions that mediate phosphodiester bond-cleavage [2]Domain
APF14641Helix-turn-helix DNA-binding domain of SPT6 (HTH_44)Helix-turn-helix DNA-binding domain of SPT6This helix-turn-helix represents the first of two DNA-binding domains on the SPT6 proteins.Domain
APF14632Acidic N-terminal SPT6 (SPT6_acidic)Acidic N-terminal SPT6- Family
APF14633SH2 domain (SH2_2)SH2 domain- Domain
APF14635Helix-hairpin-helix motif (HHH_7)Helix-hairpin-helix motif- Domain

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ATranscription elongation factor SPT6