3O6X
Crystal Structure of the type III Glutamine Synthetase from Bacteroides fragilis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Glutamine synthetase type III N terminal domain-like | 8047561 | 4005697 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Glutamine synthetase type III catalytic domain-like | 8104142 | 4007839 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GS N-terminal domain-like | 8104141 | 3000408 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8104143 | 3000676 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GSIII_N | e3o6xA2 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
A | Gln-synt_C | e3o6xA4 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
B | GSIII_N | e3o6xB3 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
B | Gln-synt_C | e3o6xB4 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
C | GSIII_N | e3o6xC3 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
C | Gln-synt_C | e3o6xC4 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
D | GSIII_N | e3o6xD3 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
D | Gln-synt_C | e3o6xD4 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
E | GSIII_N | e3o6xE3 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
E | Gln-synt_C | e3o6xE4 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
F | GSIII_N | e3o6xF1 | A: beta barrels | X: Ribosomal protein L25-like | H: Glutamine synthetase, N-terminal domain (From Topology) | T: Glutamine synthetase, N-terminal domain | F: GSIII_N | ECOD (1.6) |
F | Gln-synt_C | e3o6xF2 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: Gln-synt_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
B | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
C | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
D | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
E | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
F | 1.20.120.1560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00120 | Glutamine synthetase, catalytic domain (Gln-synt_C) | Glutamine synthetase, catalytic domain | - | Domain | |
PF12437 | Glutamine synthetase type III N terminal (GSIII_N) | Glutamine synthetase type III N terminal | - | Family | |
PF18318 | Glutamine synthetase C-terminal domain (Gln-synt_C-ter) | Glutamine synthetase C-terminal domain | This domain is found in type III glutamine synthetase present in Bacteroides fragilis. Glutamine synthetase (GS) are large oligomeric enzymes that catalyze the condensation of ammonium and glutamate to form glutamine, the principal source of nitrogen ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008146 | Glutamine synthetase, catalytic domain | Domain | |
IPR052725 | Glutamine Synthetase Type-3 | Family | |
IPR040577 | Glutamine synthetase, C-terminal | Domain | |
IPR027303 | Glutamine synthetase, glycine-rich site | Conserved Site | |
IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | Homologous Superfamily | |
IPR008147 | Glutamine synthetase, N-terminal domain | Domain | |
IPR022147 | Glutamine synthetase type III N-terminal | Domain |