3MR7
Crystal Structure of Adenylate/Guanylate Cyclase/Hydrolase from Silicibacter pomeroyi
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3mr7a1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
A | d3mr7a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
B | d3mr7b1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
B | d3mr7b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
C | d3mr7c1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
C | d3mr7c2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Ruegeria pomeroyi DSS-3 ) [TaxId: 246200 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Adenylyl and guanylyl cyclase catalytic domain | 8064541 | 4001316 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064542 | 3001272 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064542 | 3001272 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064542 | 3001272 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Guanylate_cyc | e3mr7A1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: Guanylate_cyc | ECOD (1.6) |
B | Guanylate_cyc | e3mr7B1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: Guanylate_cyc | ECOD (1.6) |
C | Guanylate_cyc | e3mr7C1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: Guanylate_cyc | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (4.3.0) |
B | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (4.3.0) |
C | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00211 | Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) | Adenylate and Guanylate cyclase catalytic domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050471 | AB hydrolase | Family | |
IPR000073 | Alpha/beta hydrolase fold-1 | Domain | |
IPR001054 | Adenylyl cyclase class-3/4/guanylyl cyclase | Domain | |
IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily | |
IPR029787 | Nucleotide cyclase | Homologous Superfamily |