Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3kg2a1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Ad3kg2a2 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Ad3kg2a3 Membrane and cell surface proteins and peptides Gated ion channels Ligand-gated ion channels Ionotropic glutamate receptor 2 (GluR2) ligand channel domain Ionotropic glutamate receptor 2 (GluR2) ligand channel domain rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd3kg2b1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd3kg2b2 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd3kg2b3 Membrane and cell surface proteins and peptides Gated ion channels Ligand-gated ion channels Ionotropic glutamate receptor 2 (GluR2) ligand channel domain Ionotropic glutamate receptor 2 (GluR2) ligand channel domain rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd3kg2c1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd3kg2c2 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd3kg2c3 Membrane and cell surface proteins and peptides Gated ion channels Ligand-gated ion channels Ionotropic glutamate receptor 2 (GluR2) ligand channel domain Ionotropic glutamate receptor 2 (GluR2) ligand channel domain rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd3kg2d1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd3kg2d2 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd3kg2d3 Membrane and cell surface proteins and peptides Gated ion channels Ligand-gated ion channels Ionotropic glutamate receptor 2 (GluR2) ligand channel domain Ionotropic glutamate receptor 2 (GluR2) ligand channel domain rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyType 2 solute binding protein-like 8036483 3000083 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyType 2 solute binding protein-like 8036483 3000083 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyType 2 solute binding protein-like 8036483 3000083 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyType 2 solute binding protein-like 8036483 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALig_chane3kg2A3 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Lig_chanECOD (1.6)
AANF_receptor_2nde3kg2A4 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_2ndECOD (1.6)
AANF_receptor_1ste3kg2A1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_1stECOD (1.6)
ALig_chan_3e3kg2A5 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
ASBP_bac_3_1ste3kg2A2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
BLig_chane3kg2B4 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Lig_chanECOD (1.6)
BANF_receptor_2nde3kg2B2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_2ndECOD (1.6)
BANF_receptor_1ste3kg2B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_1stECOD (1.6)
BLig_chan_3e3kg2B3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
BSBP_bac_3_1ste3kg2B5 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
CLig_chane3kg2C4 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Lig_chanECOD (1.6)
CANF_receptor_2nde3kg2C2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_2ndECOD (1.6)
CANF_receptor_1ste3kg2C1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_1stECOD (1.6)
CLig_chan_3e3kg2C5 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
CSBP_bac_3_1ste3kg2C3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
DLig_chane3kg2D4 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Lig_chanECOD (1.6)
DANF_receptor_2nde3kg2D2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_2ndECOD (1.6)
DANF_receptor_1ste3kg2D1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: ANF_receptor_1stECOD (1.6)
DLig_chan_3e3kg2D3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
DSBP_bac_3_1ste3kg2D5 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A, B, C, D
PF01094Receptor family ligand binding region (ANF_receptor)Receptor family ligand binding region- Family
A, B, C, D
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Glutamate receptor 2

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage