Closed ternary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminated primer template pair and phosphonoformic acid.
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
C [auth E] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8033949 | 3001272 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8033949 | 3001272 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Ribonuclease H-like | 8033947 | 3000143 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
C [auth E] | F_UNCLASSIFIED | e3kd5E5 | A: alpha bundles | X: thumb domain in bacteriophage RB69-like DNA polymerase I (From Topology) | H: thumb domain in bacteriophage RB69-like DNA polymerase I (From Topology) | T: thumb domain in bacteriophage RB69-like DNA polymerase I | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth E] | F_UNCLASSIFIED | e3kd5E6 | A: alpha bundles | X: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) | H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) | T: fingers domain in bacteriophage RB69-like DNA polymerase I | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth E] | PF00136 | e3kd5E7 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00136 | ECOD (1.6) |
C [auth E] | PF03104 | e3kd5E4 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF03104 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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A [auth T] | DNA (5'-D(*CP*GP*TP*CP*TP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3') | - | - | - |
B [auth P] | DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*AP*(4DG))-3') | - | - | - |
C [auth E] | DNA polymerase | | | - |