3K2T
Crystal structure of Lmo2511 protein from Listeria monocytogenes, northeast structural genomics consortium target LkR84A
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Hibernation promoting factor (HPF), C-terminal domain-like | 8045353 | 4004430 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Hibernation promoting factor (HPF), C-terminal domain-like | 8052702 | 3002136 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribosom_S30AE_C | e3k2tA1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16321 | Sigma 54 modulation/S30EA ribosomal protein C terminus (Ribosom_S30AE_C) | Sigma 54 modulation/S30EA ribosomal protein C terminus | This domain often occurs at the C-terminus of proteins containing Pfam:PF02482. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003489 | Ribosome hibernation promoting factor/RaiA | Family | |
IPR034694 | Ribosome hibernation promoting factor, long/plastid | Family | |
IPR036567 | Ribosome hibernation promotion factor-like | Homologous Superfamily | |
IPR032528 | Sigma 54 modulation/S30EA ribosomal protein, C-terminal | Domain | |
IPR038416 | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR050574 | HPF/YfiA ribosome-associated | Family |