3IXS
Ring1B C-terminal domain/RYBP C-terminal domain Complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Ubiquitin-like | 8055976 | 3000157 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2B (2022-06-29) |
F | SCOP2 Family | Yaf2/RYBP C-terminal binding motif-like | 8046650 | 4005214 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2 (2022-06-29) |
H | SCOP2B Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Yaf2/RYBP C-terminal binding motif-like | 8102967 | 3002774 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RAWUL | e3ixsA1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
C | RAWUL | e3ixsC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
E | RAWUL | e3ixsE1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
G | RAWUL | e3ixsG1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
I | RAWUL | e3ixsI1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
K | RAWUL | e3ixsK1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
C | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
E | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
G | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
I | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
K | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16207 | RAWUL domain RING finger- and WD40-associated ubiquitin-like (RAWUL) | RAWUL domain RING finger- and WD40-associated ubiquitin-like | The RAWUL domain is found at the C-terminus of poly-comb group RING finger proteins. It is a ubiquitin-like domain [1]. RAWUL binds directly to PUFD, a domain on BCOR proteins (BCL6 corepressor). BCOR has emerged as an important player in developm ... | Domain | |
PF17219 | Yaf2/RYBP C-terminal binding motif (YAF2_RYBP) | Yaf2/RYBP C-terminal binding motif | - | Motif |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043540 | E3 ubiquitin-protein ligase RING1/RING2 | Family | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR032443 | RAWUL domain | Domain | |
IPR037937 | E3 ubiquitin-protein ligase RING2, RAWUL domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR036443 | Zinc finger, RanBP2-type superfamily | Homologous Superfamily | |
IPR039958 | RING1 and YY1-binding protein/YY1-associated factor 2 | Family | |
IPR033774 | Yaf2/RYBP C-terminal binding motif | Conserved Site | |
IPR001876 | Zinc finger, RanBP2-type | Domain |