3IG2
The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | tRNA-synt_2d_1 | e3ig2A1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: tRNA-synt_2d_1 | ECOD (1.6) |
B | tRNA-synt_2d_1 | e3ig2B1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: tRNA-synt_2d_1 | ECOD (1.6) |
C | tRNA-synt_2d_1 | e3ig2C1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: tRNA-synt_2d_1 | ECOD (1.6) |
D | tRNA-synt_2d_1 | e3ig2D1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: tRNA-synt_2d_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
B | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
C | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
D | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
IPR045060 | Phenylalanine-tRNA ligase, class IIc, beta subunit | Family | |
IPR020825 | Phenylalanyl-tRNA synthetase-like, B3/B4 | Homologous Superfamily | |
IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Homologous Superfamily | |
IPR002547 | tRNA-binding domain | Domain | |
IPR005147 | tRNA synthetase, B5-domain | Domain | |
IPR005146 | B3/B4 tRNA-binding domain | Domain | |
IPR041616 | Phenylalanyl tRNA synthetase beta chain, core domain | Domain | |
IPR033714 | Phenylalanly tRNA synthetase, tRNA-binding-domain | Domain | |
IPR005121 | Ferrodoxin-fold anticodon-binding domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR036690 | Ferrodoxin-fold anticodon-binding domain superfamily | Homologous Superfamily | |
IPR004532 | Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type | Family |