3HYJ
Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth D] | SCOP2 Family | WhiA N-terminal domain-like | 8044671 | 4004071 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Family | WhiA C-terminal domain-like | 8050095 | 4006768 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Superfamily | Homing endonucleases | 8051942 | 3000266 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Superfamily | Homing endonucleases | 8051943 | 3000266 | SCOP2 (2022-06-29) |
A | SCOP2B Superfamily | Homing endonucleases | 8051943 | 3000266 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Homing endonucleases | 8051942 | 3000266 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | PF10298 | e3hyjD3 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF10298 | ECOD (1.6) |
B [auth D] | PF14527 | e3hyjD2 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF14527 | ECOD (1.6) |
A | PF10298 | e3hyjA5 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF10298 | ECOD (1.6) |
A | PF14527 | e3hyjA4 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF14527 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth D] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
A | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth D] | PF14527 | WhiA LAGLIDADG-like domain (LAGLIDADG_WhiA) | WhiA LAGLIDADG-like domain | This domain is found within the sporulation regulator WhiA. It is a LAGLIDADG superfamily like domain [1-2]. | Domain |
A, B [auth D] | PF10298 | WhiA N-terminal LAGLIDADG-like domain (WhiA_N) | WhiA N-terminal LAGLIDADG-like domain | This domain is found at the N terminal of sporulation factor WhiA. This domain is related to the LAGLIDADG Homing endonuclease domain while the C terminal domain of WhiA is predicted to be a DNA binding helix-turn-helix domain [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth D] | Protein DUF199/WhiA | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth D] | IPR018478 | Sporulation transcription regulator WhiA, N-terminal domain | Domain |
A, B [auth D] | IPR003802 | Sporulation regulator WhiA | Family |
A, B [auth D] | IPR039518 | WhiA, LAGLIDADG-like domain | Domain |
A, B [auth D] | IPR027434 | Homing endonuclease | Homologous Superfamily |
A, B [auth D] | IPR023054 | Sporulation regulator WhiA, C-terminal | Domain |