3E0J
X-ray structure of the complex of regulatory subunits of human DNA polymerase delta
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Metallo-dependent phosphatases | 8053383 | 3001067 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-dependent phosphatases | 8053383 | 3001067 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Metallo-dependent phosphatases | 8053383 | 3001067 | SCOP2B (2022-06-29) |
G | SCOP2 Family | DNA polymerase subunit-like | 8045195 | 4004346 | SCOP2 (2022-06-29) |
G | SCOP2 Family | DNA polymerase alpha OB-fold domain-like | 8053385 | 4007079 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Metallo-dependent phosphatases | 8053383 | 3001067 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Nucleic acid-binding proteins | 8053386 | 3000135 | SCOP2 (2022-06-29) |
B | SCOP2 Family | PolD3 N-terminal domain-like | 8044993 | 4004241 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Winged helix DNA-binding domain | 8054002 | 3000034 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Winged helix DNA-binding domain | 8054002 | 3000034 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Winged helix DNA-binding domain | 8054002 | 3000034 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Winged helix DNA-binding domain | 8054002 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG2732 | e3e0jA3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2732 | ECOD (1.6) |
A | DNA_pol_E_B | e3e0jA2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
C | KOG2732 | e3e0jC5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2732 | ECOD (1.6) |
C | DNA_pol_E_B | e3e0jC2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
E | KOG2732 | e3e0jE5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2732 | ECOD (1.6) |
E | DNA_pol_E_B | e3e0jE2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
G | KOG2732 | e3e0jG5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: KOG2732 | ECOD (1.6) |
G | DNA_pol_E_B | e3e0jG2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
B | CDC27 | e3e0jB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: CDC27 | ECOD (1.6) |
D | CDC27 | e3e0jD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: CDC27 | ECOD (1.6) |
F | CDC27 | e3e0jF1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: CDC27 | ECOD (1.6) |
H | CDC27 | e3e0jH1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: CDC27 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024826 | DNA polymerase delta/II small subunit family | Family | |
IPR007185 | DNA polymerase alpha/delta/epsilon, subunit B | Domain | |
IPR040663 | DNA polymerase delta subunit, OB-fold domain | Domain | |
IPR041863 | DNA polymerase delta subunit 2, C-terminal domain | Domain | |
IPR019038 | DNA polymerase delta subunit 3 | Family | |
IPR041913 | DNA polymerase delta subunit 3 superfamily | Homologous Superfamily |