3DSC
Crystal structure of P. furiosus Mre11 DNA synaptic complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dsca_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | DNA double-strand break repair nuclease | Mre11 | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00149 | e3dscA2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: PF00149 | ECOD (1.6) |
A | PF22411 | e3dscA1 | A: a+b four layers | X: Mre11 nuclease C-terminal domain (From Topology) | H: Mre11 nuclease C-terminal domain (From Topology) | T: Mre11 nuclease C-terminal domain | F: PF22411 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
A | 3.30.110.80 | Alpha Beta | 2-Layer Sandwich | Translation Initiation Factor IF3 | DNA double-strand break repair nuclease | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00149 | Calcineurin-like phosphoesterase (Metallophos) | Calcineurin-like phosphoesterase | This family includes a diverse range of phosphoesterases [1], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD Swiss:P13457 or ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004843 | Calcineurin-like phosphoesterase domain, ApaH type | Domain | |
IPR032885 | DNA double-strand break repair protein Mre11, archaea-type | Family | |
IPR041796 | Mre11 nuclease, N-terminal metallophosphatase domain | Domain | |
IPR029052 | Metallo-dependent phosphatase-like | Homologous Superfamily |