3CLO
Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GerE | e3cloA3 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
A | UNK_F_TYPE | e3cloA1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: UNK_F_TYPE | ECOD (1.6) |
B | GerE | e3cloB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
B | UNK_F_TYPE | e3cloB2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: UNK_F_TYPE | ECOD (1.6) |
C | GerE | e3cloC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
C | UNK_F_TYPE | e3cloC2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
C | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
C | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000792 | Transcription regulator LuxR, C-terminal | Domain | |
IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |