3CB2
Crystal structure of human gamma-tubulin bound to GDP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3cb2a1 | Alpha and beta proteins (a/b) | Tubulin nucleotide-binding domain-like | Tubulin nucleotide-binding domain-like | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d3cb2a2 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | Tubulin C-terminal domain-like | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3cb2b1 | Alpha and beta proteins (a/b) | Tubulin nucleotide-binding domain-like | Tubulin nucleotide-binding domain-like | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3cb2b2 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | Tubulin C-terminal domain-like | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Tubulin_C | e3cb2A1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: Tubulin C-terminal domain-like (From Topology) | T: Tubulin C-terminal domain-like | F: Tubulin_C | ECOD (1.6) |
A | Tubulin | e3cb2A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Tubulin nucleotide-binding domain-like | F: Tubulin | ECOD (1.6) |
B | Tubulin_C | e3cb2B4 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: Tubulin C-terminal domain-like (From Topology) | T: Tubulin C-terminal domain-like | F: Tubulin_C | ECOD (1.6) |
B | Tubulin | e3cb2B3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Tubulin nucleotide-binding domain-like | F: Tubulin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1440 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Tubulin/FtsZ, GTPase domain | CATH (4.3.0) |
A | 3.30.1330.20 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
A | 1.10.287.600 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
B | 3.40.50.1440 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Tubulin/FtsZ, GTPase domain | CATH (4.3.0) |
B | 3.30.1330.20 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
B | 1.10.287.600 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain | |
PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008280 | Tubulin/FtsZ, C-terminal | Homologous Superfamily | |
IPR002454 | Gamma tubulin | Family | |
IPR017975 | Tubulin, conserved site | Conserved Site | |
IPR023123 | Tubulin, C-terminal | Homologous Superfamily | |
IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain | Domain | |
IPR003008 | Tubulin/FtsZ, GTPase domain | Domain | |
IPR037103 | Tubulin/FtsZ-like, C-terminal domain | Homologous Superfamily | |
IPR000217 | Tubulin | Family | |
IPR036525 | Tubulin/FtsZ, GTPase domain superfamily | Homologous Superfamily |