3BK3
Crystal structure of the complex of BMP-2 and the first Von Willebrand domain type C of Crossveinless-2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3bk3a_ | Small proteins | Cystine-knot cytokines | Cystine-knot cytokines | Transforming growth factor (TGF)-beta | Bone morphogenetic protein-2 (BMP-2) | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3bk3b_ | Small proteins | Cystine-knot cytokines | Cystine-knot cytokines | Transforming growth factor (TGF)-beta | Bone morphogenetic protein-2 (BMP-2) | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TGF_beta | e3bk3A1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: TGF_beta | ECOD (1.6) |
B | TGF_beta | e3bk3B1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: TGF_beta | ECOD (1.6) |
C | VWC | e3bk3C1 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: VWC domain-related | F: VWC | ECOD (1.6) |
D | VWC | e3bk3D1 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: VWC domain-related | F: VWC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
B | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
C | 6.20.200.20 | Special | Other non-globular | Defensin A-like | CATH (4.3.0) | |
D | 6.20.200.20 | Special | Other non-globular | Defensin A-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00019 | Transforming growth factor beta like domain (TGF_beta) | Transforming growth factor beta like domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029034 | Cystine-knot cytokine | Homologous Superfamily | |
IPR047953 | Bone morphogenetic protein 2, TGF-beta-like domain | Domain | |
IPR017948 | Transforming growth factor beta, conserved site | Conserved Site | |
IPR001839 | Transforming growth factor-beta, C-terminal | Domain | |
IPR015615 | Transforming growth factor-beta-related | Family | |
IPR001111 | TGF-beta, propeptide | Domain | |
IPR052424 | Kielin/Chordin-like & BMP-binding Regulator | Family | |
IPR002919 | Trypsin Inhibitor-like, cysteine rich domain | Domain | |
IPR001007 | VWFC domain | Domain | |
IPR001846 | von Willebrand factor, type D domain | Domain | |
IPR014853 | VWF/SSPO/Zonadhesin-like, cysteine-rich domain | Domain | |
IPR036084 | Serine protease inhibitor-like superfamily | Homologous Superfamily |