2FK1
Structure of the Alzheimer's Amyloid Precursor Protein (APP) Copper Binding Domain in 'small unit cell' form, Cu(II)-bound
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2fk1a1 | Alpha and beta proteins (a+b) | Dodecin subunit-like | Amyloid beta a4 protein copper binding domain (domain 2) | Amyloid beta a4 protein copper binding domain (domain 2) | Amyloid beta a4 protein copper binding domain (domain 2) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2fk1a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Amyloid beta a4 protein copper binding domain (domain 2) | 8041099 | 3000618 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12924 | e2fk1A1 | A: a+b two layers | X: Dodecin subunit-like | H: Amyloid beta a4 protein copper binding domain (domain 2) (From Topology) | T: Amyloid beta a4 protein copper binding domain (domain 2) | F: PF12924 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1490.140 | Alpha Beta | 2-Layer Sandwich | Dna Ligase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12924 | Copper-binding of amyloid precursor, CuBD (APP_Cu_bd) | Copper-binding of amyloid precursor, CuBD | This short domain, part of the extra-cellular N-terminus of the amyloid precursor protein, APP, can bind both copper and zinc, CuBD. The structure of Cu2+-bound CuBD reveals that the metal ligands are His147, His151, Tyr168 and two water molecules, ... | Domain |