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2YUO
Solution structure of the SH3 domain of mouse RUN and TBC1 domain containing 3
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification
SCOP-e Database Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
Provenance Source (Version)
A
d2yuoa1
All beta proteins
SH3-like barrel
SH3-domain
automated matches
automated matches
house mouse
(
Mus musculus
) [TaxId:
10090
],
SCOPe (2.08)
A
d2yuoa3
Artifacts
Tags
Tags
Tags
C-terminal Tags
house mouse
(
Mus musculus
) [TaxId:
10090
],
SCOPe (2.08)
A
d2yuoa2
Artifacts
Tags
Tags
Tags
N-terminal Tags
house mouse
(
Mus musculus
) [TaxId:
10090
],
SCOPe (2.08)
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2 Family
SH3-domain
8067923
4000369
SCOP2 (2022-06-29)
A
SCOP2 Superfamily
SH3-domain
8067924
3000153
SCOP2 (2022-06-29)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
SH3_1
e2yuoA1
A: beta barrels
X: SH3
H: SH3
T: SH3
F: SH3_1
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
2.30.30.40
Mainly Beta
Roll
SH3 type barrels.
SH3 Domains
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF00018
SH3 domain (SH3_1)
SH3 domain
SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel.
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
RUN and TBC1 domain containing 3
small GTPase binding
protein binding
binding
enzyme binding
GTPase binding
GTPase regulator activity
enzyme regulator activity
nucleoside-triphosphatase regulator activity
molecular function regulator activity
enzyme activator activity
GTPase activator activity
molecular function activator activity
cellular response to stimulus
regulation of biological process
small GTPase-mediated signal transduction
regulation of cellular process
response to stimulus
signaling
biological regulation
intracellular signal transduction
cell communication
intracellular signaling cassette
cellular process
signal transduction
Rap protein signal transduction
localization
cellular response to stimulus
regulation of biological process
small GTPase-mediated signal transduction
regulation of cellular process
response to stimulus
signaling
biological regulation
intracellular signal transduction
cell communication
intracellular signaling cassette
cellular process
signal transduction
Rap protein signal transduction
localization
transport
plasma membrane to endosome transport
establishment of localization
vesicle-mediated transport
regulation of signaling
regulation of small GTPase mediated signal transduction
regulation of signal transduction
regulation of intracellular signal transduction
regulation of response to stimulus
regulation of cell communication
Rab protein signal transduction
regulation of Rab protein signal transduction
cell cycle
regulation of cell cycle
catabolic process
positive regulation of protein metabolic process
positive regulation of biological process
macromolecule catabolic process
regulation of primary metabolic process
positive regulation of metabolic process
positive regulation of macromolecule metabolic process
protein metabolic process
organonitrogen compound catabolic process
organonitrogen compound metabolic process
regulation of protein metabolic process
primary metabolic process
regulation of macromolecule metabolic process
protein catabolic process
regulation of catabolic process
positive regulation of protein catabolic process
positive regulation of catabolic process
metabolic process
macromolecule metabolic process
regulation of metabolic process
regulation of protein catabolic process
Less
cell-cell junction
anchoring junction
gap junction
cell junction
cellular anatomical entity
intracellular anatomical structure
cytoplasm
cytosol
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR037213
RUN domain superfamily
Homologous Superfamily
A
IPR035833
SGSM3, SH3 domain
Domain
A
IPR004012
RUN domain
Domain
A
IPR050302
Rab GTPase-activating TBC domain-containing protein
Family
A
IPR001452
SH3 domain
Domain
A
IPR035969
Rab-GAP-TBC domain superfamily
Homologous Superfamily
A
IPR036028
SH3-like domain superfamily
Homologous Superfamily
A
IPR000195
Rab-GAP-TBC domain
Domain
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