2RB6

X-Ray structure of the protein Q8EI81. Northeast Structural Genomics Consortium target SoR78A

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2rb6a1	All beta proteins	Sm-like fold	Sm-like ribonucleoproteins	YgdI/YgdR-like	Uncharacterized protein SO0963	(Shewanella oneidensis MR-1 ) [TaxId: 211586 ],	SCOPe (2.08)
A	d2rb6a2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shewanella oneidensis MR-1 ) [TaxId: 211586 ],	SCOPe (2.08)
B	d2rb6b2	All beta proteins	Sm-like fold	Sm-like ribonucleoproteins	YgdI/YgdR-like	Uncharacterized protein SO0963	(Shewanella oneidensis MR-1 ) [TaxId: 211586 ],	SCOPe (2.08)
B	d2rb6b3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shewanella oneidensis MR-1 ) [TaxId: 211586 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YgdI/YgdR-like	8024380	4001696	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Sm-like ribonucleoproteins	8036759	3000419	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Sm-like ribonucleoproteins	8036759	3000419	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF06004	e2rb6A1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF06004	ECOD (1.6)
B	PF06004	e2rb6B1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF06004	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
B	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF06004	Bacterial protein of unknown function (DUF903) (DUF903)	Bacterial protein of unknown function (DUF903)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR010920	LSM domain superfamily	Homologous Superfamily
A, B	IPR010305	Lipoprotein YgdI/YgdR-like	Family
A, B	IPR047807	Lipoprotein YgdI/YgdR-like, SH3-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.