2PN0
Prokaryotic transcription elongation factor GreA/GreB from Nitrosomonas europaea
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14760 | e2pn0A1 | A: alpha bundles | X: Long alpha-hairpin | H: GreA transcript cleavage protein, N-terminal domain (From Topology) | T: GreA transcript cleavage protein, N-terminal domain | F: PF14760 | ECOD (1.6) |
A | PF01272 | e2pn0A2 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF01272 | ECOD (1.6) |
B | PF14760 | e2pn0B1 | A: alpha bundles | X: Long alpha-hairpin | H: GreA transcript cleavage protein, N-terminal domain (From Topology) | T: GreA transcript cleavage protein, N-terminal domain | F: PF14760 | ECOD (1.6) |
B | PF01272 | e2pn0B2 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF01272 | ECOD (1.6) |
C | PF14760 | e2pn0C2 | A: alpha bundles | X: Long alpha-hairpin | H: GreA transcript cleavage protein, N-terminal domain (From Topology) | T: GreA transcript cleavage protein, N-terminal domain | F: PF14760 | ECOD (1.6) |
C | PF01272 | e2pn0C1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF01272 | ECOD (1.6) |
D | PF14760 | e2pn0D1 | A: alpha bundles | X: Long alpha-hairpin | H: GreA transcript cleavage protein, N-terminal domain (From Topology) | T: GreA transcript cleavage protein, N-terminal domain | F: PF14760 | ECOD (1.6) |
D | PF01272 | e2pn0D2 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF01272 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.286.20 | Mainly Alpha | Orthogonal Bundle | GTP Cyclohydrolase I | Chain A, domain 1 | CATH (4.3.0) |
A | 3.10.50.30 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
B | 1.10.286.20 | Mainly Alpha | Orthogonal Bundle | GTP Cyclohydrolase I | Chain A, domain 1 | CATH (4.3.0) |
B | 3.10.50.30 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
C | 1.10.286.20 | Mainly Alpha | Orthogonal Bundle | GTP Cyclohydrolase I | Chain A, domain 1 | CATH (4.3.0) |
C | 3.10.50.30 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
D | 1.10.286.20 | Mainly Alpha | Orthogonal Bundle | GTP Cyclohydrolase I | Chain A, domain 1 | CATH (4.3.0) |
D | 3.10.50.30 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01272 | Transcription elongation factor, GreA/GreB, C-term (GreA_GreB) | Transcription elongation factor, GreA/GreB, C-term | This domain has an FKBP-like fold. | Domain | |
PF14760 | Rnk N-terminus (Rnk_N) | Rnk N-terminus | This domain occurs at the N-terminus of Rnk, an RNA polymerase-interacting protein of the GreA/GreB family (Pfam:PF01272). It has a coiled coil structure [1]. | Domain |