2PIH

Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2pihb_	All alpha proteins	YheA-like	YheA/YmcA-like	YmcA-like	Uncharacterized protein YmcA	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2piha1	All alpha proteins	YheA-like	YheA/YmcA-like	YmcA-like	Uncharacterized protein YmcA	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	YheA/YmcA-like	8035667	3001682	SCOP2B (2022-06-29)
A	SCOP2 Family	YmcA-like	8023287	4001487	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YheA/YmcA-like	8035667	3001682	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Com_YlbF	e2pihB1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)
A	Com_YlbF	e2pihA1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)
A	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF06133	Control of competence regulator ComK, YlbF/YmcA (Com_YlbF)	Control of competence regulator ComK, YlbF/YmcA	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR023378	YheA/YmcA-like domain superfamily	Homologous Superfamily
A, B	IPR016783	Biofilm formation YmcA	Family
A, B	IPR010368	Control of competence regulator ComK, YlbF/YmcA	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.