2OCF
Human estrogen receptor alpha ligand-binding domain in complex with estradiol and the E2#23 FN3 monobody
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2ocfa_ | All alpha proteins | Nuclear receptor ligand-binding domain | Nuclear receptor ligand-binding domain | Nuclear receptor ligand-binding domain | Estrogen receptor alpha | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth D] | d2ocfd_ | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nuclear receptor ligand-binding domain | 8044103 | 3001442 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | Fibronectin type III | 8055103 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00104 | e2ocfA1 | A: alpha arrays | X: Nuclear receptor ligand-binding domain (From Topology) | H: Nuclear receptor ligand-binding domain (From Topology) | T: Nuclear receptor ligand-binding domain | F: PF00104 | ECOD (1.6) |
B [auth D] | PF00041 | e2ocfD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00041 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.565.10 | Mainly Alpha | Orthogonal Bundle | Retinoid X Receptor | Retinoid X Receptor | CATH (4.3.0) |
B [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00104 | Ligand-binding domain of nuclear hormone receptor (Hormone_recep) | Ligand-binding domain of nuclear hormone receptor | This all helical domain is involved in binding the hormone in these receptors. | Domain | |
B [auth D] | PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
IPR024736 | Oestrogen-type nuclear receptor final C-terminal domain | Domain | |
IPR001292 | Estrogen receptor | Family | |
IPR024178 | Estrogen receptor/oestrogen-related receptor | Family | |
IPR001723 | Nuclear hormone receptor | Family | |
IPR046944 | Estrogen receptor, N-terminal | Domain | |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily | |
B [auth D] | IPR000562 | Fibronectin type II domain | Domain |
B [auth D] | IPR000083 | Fibronectin, type I | Domain |
B [auth D] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
B [auth D] | IPR036943 | Fibronectin type II domain superfamily | Homologous Superfamily |
B [auth D] | IPR013806 | Kringle-like fold | Homologous Superfamily |
B [auth D] | IPR003961 | Fibronectin type III | Domain |
B [auth D] | IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |