2MQH
Solution structure of the Chlamydomonas reinhardtii NAB1 cold shock domain, CSD1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2mqha1 | All beta proteins | OB-fold | Nucleic acid-binding proteins | automated matches | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
A | d2mqha2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00313 | 'Cold-shock' DNA-binding domain (CSD) | 'Cold-shock' DNA-binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Nucleic acid binding protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR000504 | RNA recognition motif domain | Domain | |
IPR011129 | Cold shock domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR019844 | Cold-shock (CSD) domain | Domain | |
IPR002059 | Cold-shock protein, DNA-binding | Domain | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |